Pyrococcus furiosus DSM 3638: PF1563
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Entry
PF1563 CDS
T00075
Name
(GenBank) DNA-directed RNA polymerase subunit a'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
pfu
Pyrococcus furiosus DSM 3638
Pathway
pfu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pfu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PF1563
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfu03021
]
PF1563
Enzymes [BR:
pfu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PF1563
Transcription machinery [BR:
pfu03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
PF1563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
AP_endonuc_2
Styelin
Motif
Other DBs
NCBI-ProteinID:
AAL81687
UniProt:
Q8U0M4
Structure
PDB
PDBj
LinkDB
All DBs
Position
complement(1456903..1459626)
Genome browser
AA seq
907 aa
AA seq
DB search
MKKVIGSIEFGILSPQEIRKMSAVEVTVPDTYDDDGYPIEGGVMDKRMGVIDPGLRCETC
GGRAGECPGHFGHIELARPVIHVGFAKTIYRILESTCRECGRIKLTDEEIEEYMKKIELA
RNRRSEFNEIIKEIHKKAKERMVCPHCGAPQYPIKFEKPTIYWEIRKDEQGNEYRHRLMP
TEVRDWLEKIPDKDLPLLGLDPEKSRPEWMVLTVLPVPPVTARPSITLETGIRAEDDLTH
KLVDIIRINNRLKQNIEAGAPQLIIEDLWDLLQYHVTTYINNEAPGVPPAKHKSGRPLKT
LAQRLKGKEGRFRGNLSGKRVNFSARTVISPDPMISINEVGVPVEVAMELTVPEKVTEFN
IERLRKMVLNGPDKYPGANYVIDPEGRRRRIMDSNKETLANQLDIGWTVERHLMDGDIVL
FNRQPSLHRMSIMAHRVRVMPYRTFRLNLAVCPPYNADFDGDEMNLHVPQTEEAQAEARI
LMEVQNHIISPRYGGPIIGGIQDHISGGYLLTREGAYFTRDEVEQMLMFAGVDITELPEP
DKYDENGNPLWSGKTIFSLLLPEDLTVWYRNKLCDEPERCEALEKLIEEKLMPDPEEVRK
LAYDGFVYIQNGKLLSGAIDKKAYGREDGIILDLIVREYGVERARQFLDQVTKLTIWVIT
HKGFTTGIDDEDLPEEARDRIREIIREAEERVNKLIEAYKRGELEPLPGKSLEDTLESLI
MAVLAEARDNAGAVAEKYLGMDNHTVIMAKTGARGKILNITQMAALLGQQSIRGKRLYRG
FRGRVLSHFKPGDLGARAKGFVVNSYKSGLTPQEYFFHAMGGREGLVDTAVRTAQSGYMQ
RRLINALQDLKVEYDGTVRSPEGIIVQFKYGEDGVDPMKSWRGKTVDVDRIIVRTLLKMR
GNNKAKV
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagttattggaagtattgagtttggcatcctctctcctcaagaaattagaaaa
atgagtgctgtggaagtcacagtaccagatacttacgatgacgatggttatccaatagaa
ggcggagtaatggacaaaagaatgggggtaatagacccaggacttagatgtgaaacgtgt
ggaggaagggcaggagaatgtccaggacactttggtcacattgaacttgctcgtcctgtt
attcacgtaggatttgcaaagacgatctatagaatcttggaaagtacatgtagagaatgt
ggaagaataaaactcacagatgaggaaatcgaagagtacatgaagaaaattgaactagcg
agaaatagaagaagtgaatttaatgaaattattaaagagattcacaaaaaggcaaaagag
agaatggtatgtcctcactgtggagctcctcagtatcctataaaattcgaaaaaccaaca
atctactgggaaattagaaaagatgagcaaggaaatgaatataggcacagattgatgcca
actgaagttagagattggttagaaaaaatacctgacaaggatttacccctcctgggactt
gacccagaaaaatcaagaccagagtggatggttctcacagttttgcctgttcccccagta
actgctagaccttctataactttggagaccggtataagagctgaagatgacttaactcat
aaacttgttgacataataaggataaataacaggctaaagcagaatatagaagctggagct
cctcagttgattattgaggatctctgggatctcttgcagtatcacgttacaacttacatt
aacaatgaagctccaggagttcctcctgccaagcacaagagtggtaggccattaaaaact
ctagctcagagacttaaaggaaaagaaggtagatttagaggaaacctgagcggtaagaga
gtcaacttctcagctagaacagttatcagtccagacccaatgataagcataaacgaagtt
ggagtgccagttgaagtcgcaatggaattaacagttccagaaaaggtcactgaatttaat
attgagagactaaggaaaatggtccttaatggcccagacaaatatcccggagctaactac
gtgatagaccccgagggtagaagaaggagaatcatggatagcaacaaggaaactctcgcc
aatcaactggacataggatggacagttgagaggcatctaatggatggagatatagtgctg
tttaacagacagccatcattacacagaatgagcattatggctcacagagtaagggtcatg
ccctacagaacattccgtctcaacttggctgtatgtccaccatacaatgctgattttgat
ggagatgagatgaatctgcacgttccacaaacggaggaagctcaagctgaggctaggatt
ctaatggaagttcaaaaccacataatctctccaagatatggtggtccaataattggtgga
attcaagatcacatctctggaggctatctgttaactagggagggcgcatacttcacgaga
gacgaagttgagcaaatgttgatgttcgctggtgtagatataacagaactcccagaaccc
gataagtatgacgagaatggaaatccactgtggagtgggaagacaatattctctctctta
cttccagaagacctgacagtgtggtataggaataagctgtgtgacgagcccgagcgttgt
gaagctcttgagaagctgatagaagagaagttaatgccagatccggaggaagtaagaaag
cttgcttacgatggattcgtgtacattcagaatggaaagctcttaagtggagctattgac
aagaaggcctatggtagagaggatggaattatccttgacttgattgtgagagaatatggc
gtagagagagccagacaattccttgatcaagttacaaagctaacaatatgggtaattacc
cacaaaggatttacaacgggcatagatgacgaagaccttccagaagaagctagggataga
ataagagagataatcagagaagccgaagaaagggttaacaagcttatagaggcatataag
agaggtgagctggaacctctcccaggaaagagccttgaagataccctggagagcttgata
atggcagttcttgccgaggctagagataatgcaggtgccgttgcagagaagtacctgggt
atggacaaccatactgtaataatggcaaagactggagctagaggtaaaatcctgaacatt
acccagatggctgctctgctcggtcaacagtcaattagaggaaagagactctatagagga
ttcagaggtagagtgctaagtcactttaagcccggggatcttggggcaagagcgaaaggt
ttcgttgtaaactcttacaagagcggtttaacacctcaagagtacttcttccacgcaatg
ggtggtagagagggtctcgtagataccgcagttagaacagcccagagcggttacatgcag
agaagactaattaacgctctacaagacctaaaggttgagtatgatggtacagttagaagt
ccagaaggaatcattgttcagttcaagtacggtgaggatggagttgatccaatgaagagt
tggagaggcaagacagttgatgtagatagaattattgtgaggactctcttaaagatgaga
ggaaataacaaggcgaaggtgtga
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