Pyrococcus furiosus DSM 3638: PF1568
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Entry
PF1568 CDS
T00075
Name
(GenBank) ribonuclease ph (rph)
KO
K11600
exosome complex component RRP41
Organism
pfu
Pyrococcus furiosus DSM 3638
Pathway
pfu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PF1568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfu03019
]
PF1568
Messenger RNA biogenesis [BR:
pfu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
PF1568
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
PF1568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Pinin_SDK_N
EF-hand_1
Motif
Other DBs
NCBI-ProteinID:
AAL81692
UniProt:
Q8U0L9
A0A5C0XR40
LinkDB
All DBs
Position
complement(1465163..1465915)
Genome browser
AA seq
250 aa
AA seq
DB search
MMLKPEGLKLIDENGRRLDGRKKYELRPIKMKVGVLKNANGSAYIEWGKNKIIAAVYGPR
EIHPKHLQRPDRAILRVRYNMAPFSVEERKKPGPDRRSIEISKVIRGALEPALILEMFPR
TAIDVFIEVLQADAGTRVAGITAASLALADAGIPMRDLVAACSAGKIEGEIVLDLNKEED
NYGEADVPVAIMPIKNDITLLQMDGYLTKEEFIEAVKLAIKGAKAVYQKQREALKEKYLK
IAQEVEGSEQ
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgaagccagagggccttaaactaattgatgagaatggtagaaggcttgatggt
agaaaaaagtatgagctcaggcctattaaaatgaaagtcggtgtcttaaagaatgcaaat
gggtctgcatacattgagtggggaaaaaataagataattgccgctgtttatgggcctaga
gaaattcatccgaagcatcttcaaagacctgatagggccatactaagagttagatacaat
atggctccttttagcgtagaagaaaggaaaaagccaggtccggacagaagaagtattgag
ataagcaaggtaatcagaggagctcttgaacctgcattaattcttgaaatgtttccaaga
actgcaatcgatgtgtttatagaagttcttcaggctgatgctggaactagagttgcagga
ataactgcagcatctcttgcactcgctgatgcggggataccaatgagagatctcgttgca
gcgtgtagtgctggaaaaattgagggagaaatagtgcttgatctaaataaggaagaagat
aactacggtgaggcagatgtaccagtagctattatgcctataaagaatgacataaccctt
cttcagatggacggttatctaacaaaggaagagttcatagaagcagtaaaattagcaata
aagggagcaaaggctgtttatcaaaaacagagggaagctcttaaagaaaaataccttaaa
atagcccaggaggttgagggaagtgagcaatga
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