Polistes fuscatus (common paper wasp): 122513473
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Entry
122513473 CDS
T07683
Name
(RefSeq) collagen alpha-1(I) chain-like
KO
K19719
collagen type II alpha
Organism
pfuc
Polistes fuscatus (common paper wasp)
Pathway
pfuc04512
ECM-receptor interaction
pfuc04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
pfuc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122513473
04518 Integrin signaling
122513473
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pfuc00536
]
122513473
Glycosaminoglycan binding proteins [BR:
pfuc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
122513473
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
122513473
NCBI-ProteinID:
XP_043485782
LinkDB
All DBs
Position
Unknown
AA seq
1501 aa
AA seq
DB search
MKRGYLNRATFGLLIFQLLLLPQVYSAKTKQRKHRPRQVQSQQTVNGEYSEYDYYDNYED
YEEKNETAIPSSSIPSTNNNLGRGRINIDSTISTFRPESITDLSSPPTTRFSEQDSLEDI
HSTVETYNNNNPLVTEIVPGESNYISSVAVPGPRGQPGRPGDSGRPGDSGYPGQPGTPGI
PGPPGPPGPLPDVSLYYQQLALSQASDDKGPSDLRPYPLPGPGPVGPRGPPGPAGLPGPQ
GFQGLRGEPGEPGLPGAPGTPGPRGLPGLPGRDGEGGENGEVGPPGSQGPVGPRGLAGMP
GLPGVKGHRGFPGLDGAKGEQGISGEKGSSGAPGPMGPIGPVGPVGPRGERGREGLPGPP
GIRGIDGIHGPPGQPGALGKPGPPGFPGNPGIKGDQGAQGPKGSQGLQGPRGEAGRPGQP
GESGPQGLQGKDGVPGEKGSSGIQGLVGLPGFPGSRGEPGIPGNPGSPGAKGTPGLPGER
GFKGDAGMKGDQGAPGPRGFPGLPGTEGKRGKRGMHGPIGPSGSPGERGTQGPRGLPGPD
GPMGPKGSPGDRGSIGPMGSKGSMGDPGRPGPSGIQGARGITGRPGSPGKPGNAGERGIQ
GADGRPGDQGPPGPQGLPGSLGPPGEKGIPGEAGKDGEPGNPGPPGPRGDAGKEGSPGSQ
GPPGPPGSAGERGPPGLTGPRGFQGLPGISGNPGLPGKDGEMGVQGPPGPAGAAGNRGER
GFPGERGLIGAPGLTGSRGEPGVQGVDGLPGLPGLKGEMGQSGPPGLVGLPGIRGFPGEP
GQKGERGMFGPVGPEGPPGRIGERGPQGPVGPPGPPGEPAERGDTGLPGPPGESGAPGAQ
GERGPQGLQGLQGFPGQQGLIGLPGLKGDRGYPGSKGDQGNPGLSGSPGEVGPPGLTGLT
GAKGIRGEPGPRGEVGSIGPPGPAGMIGQTGLPGNSGPPGPPGLPGIKGNAGDTGRPGNP
GPVGNPGIPGADGIKGESGAQGPPGLMGPQGSQGLPGERGLPGLPGPSGLMGARGIRGVT
GETGLPGKPGSDGPPGPPGLVGPTGPPGPAGEQGPEGPTGKPGLPGISGRPGDKGPPGPI
GPEGPSGPPGIPGPPGSSGSPGSVGERGPKGETGPQGVEGQQGARGKPGPIGLQGSKGER
GEEGVKGAKGHRGFNGLQGLPGSPGIPGEKGEPGMYGLPGKDGEPGVRGTPGRDGNPGLM
GLSGNPGPRGPPGEEGRHGLPGPPGPPGPPGPPGELGLGYDPASLAAFIAQGQTKGPDPL
IGDEPMRLFGKEITEEERRNLVMKAYEQLKSTFQKLIKPDGQKNSPAKTCRDLFVAYPEK
TSGEYWIDPNEGDTRDAILVYCDVEKRATCILPNPARTAEIHFISEQQEVWLSEIENVKI
TYKADSNQISFLQLLSKHAQQNITYHCKRSVAYFDSERKSYRRSMKLLTWNDVEITPRGN
QRLRYDIILDECRFRQDNWSQTIVSYNSDKPVRLPIIDIALRDIGLPDQFFSIEVGPACY
Q
NT seq
4506 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgagggtaccttaacagggccacttttggcctgttaatattccaacttttatta
ttaccccaagtttattcagcaaaaacgaaacagaggaaacatcgtcctagacaagtccaa
tctcaacagactgttaacggtgaatacagcgagtatgattattacgataattatgaagac
tatgaagagaaaaatgagacagcaataccatcgtcgtccataccttcaacaaacaataat
ttaggacgtggaagaataaatatcgactcaacaatatcaacatttaggccagaatcaatt
acagatttatcatcaccaccaacgacacgattttctgaacaagattcattagaagacata
cattctacggtggaaacctacaacaataataatcctttagtaacagaaattgttcctgga
gaaagtaattacataagttctgtggcagtacctggaccacgtggacaacctgggcgtcca
ggggatagtggaagaccgggtgactcaggatatccgggacaaccaggaactcctggaata
ccaggaccacctggaccacctggacctttacctgatgtatcgttgtattatcaacaactt
gctttatctcaagcaagcgatgacaaaggtccatcggatctcagaccgtatcctctacct
ggacctggtcctgttggtcctcgagggcctccaggaccagcaggtttgcctggtccgcaa
ggtttccaaggtcttcgtggagagccaggagaaccaggattaccaggtgcaccggggact
cctggtccacgaggtttaccaggattaccaggaagagatggtgaaggtggtgagaatgga
gaagtagggccaccaggatcacaaggaccagtaggaccaagaggacttgcaggaatgcct
ggtttaccgggtgttaaaggacaccgtggctttccaggattagatggtgctaaaggtgaa
caaggtatatctggagagaaaggatcctctggagcacctggtccaatgggaccaatagga
ccagtgggtcctgttggtccacgaggagaaaggggtagagaaggattacccggaccaccc
ggaattagaggaatcgatggaattcatggacctccgggtcaacctggtgcattaggtaaa
cccggtccaccagggttcccaggaaatcctggaattaaaggagatcaaggagcccaaggc
ccaaaaggaagtcaaggcttacaaggtccacgtggcgaagcaggacggccagggcaacct
ggagaatctggaccacaaggtttacagggtaaagatggagtacctggtgaaaaagggagc
tcaggtatacaaggcttagttgggttacccggttttcctggatctcgtggagaacctggc
ataccaggtaatcctggttcacctggagctaaaggaacacctgggttgcctggtgaaagg
ggattcaaaggtgatgcaggaatgaaaggtgatcaaggagcaccaggtccacgtggcttc
ccaggattacctggtaccgaaggaaaaagaggaaagagaggaatgcatggtccaattgga
ccatctggctcacctggtgaacgtggtacacaaggaccgcgtgggttacctggtcctgat
ggtcctatgggccctaaaggttcacctggtgatcgtggatccataggtccaatgggttca
aaaggatcaatgggagatccaggtcgtccaggaccatccggaatacaaggtgcacgtggt
ataacaggccgtccaggatcacctggaaaaccaggcaatgcaggagagcgtggaattcaa
ggtgcagatggaagacctggtgaccaaggaccaccaggaccacaaggtttacctggatca
ttagggcctcctggagagaaaggtatcccaggtgaagctggtaaagatggtgagcctggt
aatcctggtccacctgggcctcgtggtgacgctggtaaagaaggttctccaggatcacaa
ggtccaccaggaccaccaggtagtgctggagaaagaggaccaccaggtttaacagggccc
agaggttttcagggtcttcctggaatatctggcaatccaggtctaccaggtaaagatggt
gaaatgggagttcaaggaccacccggccctgccggtgctgctgggaacagaggcgaacgt
ggtttccctggtgaaagaggcttaatcggagcgccgggattaacaggatctcgaggagaa
ccaggtgttcaaggtgtcgatggacttcctggattacccgggctcaaaggagaaatggga
caatctggtccaccaggattggtgggtttacctggaatacgtggctttccaggagagcct
ggacagaagggtgaaagaggaatgtttggtcctgtcgggccagaaggaccgcctggtcgt
atcggagagcgaggtccacaaggaccagttggtcctccgggacctcccggagaaccagct
gagagaggtgatacaggtttgccgggtcctccaggtgaaagtggagctccaggtgcgcaa
ggagaaagaggacctcaaggtttacagggattgcaaggatttccaggacaacaaggactt
attggattgccaggattgaaaggagaccgtggttatccaggttctaaaggggatcaagga
aatccaggattgtctggtagtccaggcgaggtaggtccaccaggtttaacaggattgacc
ggtgcaaaaggaattagaggagaacctggccccagaggtgaagtaggctctattggtcct
cctgggccagcaggcatgatcggacaaactggattgcctggtaattctggtccccctgga
ccaccaggattgcctggtatcaaaggtaatgcaggagatacaggaagaccaggaaatcct
ggtcctgtaggaaatcctggaattcctggtgcggatggaattaaaggtgaaagcggagca
cagggtccaccaggattaatgggaccacaaggatcgcaaggtttaccaggtgaacgaggt
ttgcctggacttcctggtccatctggattaatgggtgctcgaggaatacgtggcgttaca
ggtgaaacaggcttgccagggaagccaggatcagatgggccacctggaccaccaggattg
gtaggtcctactggacctcctggcccagctggtgagcaaggtcctgaaggacctactggt
aaaccaggcctacctggaataagtggtcgtcctggtgacaaaggaccaccaggtccaatc
ggacccgaaggaccatccggacctcctggtattcctggacctcctggtagtagtggatca
cctggttctgttggagaacgtggtccaaaaggagaaacagggccgcaaggtgtagaagga
caacagggtgcacgaggaaaacctggtccaataggattgcaaggttccaaaggtgaacgt
ggtgaagaaggtgtaaaaggggccaaaggacatcgtggatttaatggattacaaggatta
ccaggatcccctggaattcctggagagaagggtgaaccaggaatgtatggtttaccagga
aaagatggtgaacctggtgttagaggaactcctggtagggatggcaatcctggcttgatg
ggtctctctggaaatccaggaccaagggggccgcctggagaagaaggtcgacatggatta
ccaggtcctcctggcccaccaggaccacctggaccacctggtgaacttggattaggctat
gatcctgcttcattggcagcattcatagcacaaggtcaaacaaaaggaccagacccatta
ataggcgacgaaccaatgagattatttggtaaagaaattactgaagaggaacgtagaaat
cttgtaatgaaagcttacgaacaattaaaatcgacgttccaaaaattaattaaaccagac
gggcagaaaaattcgccagctaaaacctgtagagatttgttcgtcgcttatccagaaaaa
acatctggtgaatattggattgatccaaacgaaggtgacacaagagatgcaattttagtt
tattgcgatgttgagaaacgtgcaacttgtattttaccaaacccagctcgtacagcagaa
attcactttattagtgaacaacaagaagtttggttgagtgaaatagaaaatgttaagatc
acgtataaagcagacagcaatcaaataagtttcctacaattactttcgaaacatgcccag
cagaatataacttatcattgtaagagaagcgtagcatattttgattctgaaagaaaaagt
tatagaagaagtatgaaacttcttacttggaacgatgttgaaataacgccacgtggtaat
caacgtttgcgatacgatataattttagacgaatgcagatttcgtcaggataattggagt
caaacaattgtttcatataactcagataaaccagtaagacttcccataatagacatagct
ctacgagatattggattacctgatcagtttttctctatcgaagtgggaccagcttgttat
caataa
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integrated database retrieval system