Polistes fuscatus (common paper wasp): 122513857
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Entry
122513857 CDS
T07683
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
pfuc
Polistes fuscatus (common paper wasp)
Pathway
pfuc03030
DNA replication
pfuc03410
Base excision repair
pfuc03420
Nucleotide excision repair
pfuc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pfuc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122513857
03410 Base excision repair
122513857
03420 Nucleotide excision repair
122513857
03430 Mismatch repair
122513857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfuc03032
]
122513857
03400 DNA repair and recombination proteins [BR:
pfuc03400
]
122513857
DNA replication proteins [BR:
pfuc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
122513857
DNA repair and recombination proteins [BR:
pfuc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
122513857
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA
BRCT
AAA_22
RuvB_N
RNA_helicase
AAA_14
BRCT_2
AAA_30
AAA_5
AAA_7
DUF1824
AAA_17
AAA_33
AAA_assoc_2
RCF1-5-like_lid
AAA_18
PTCB-BRCT
AAA_16
DUF948
Motif
Other DBs
NCBI-GeneID:
122513857
NCBI-ProteinID:
XP_043486264
LinkDB
All DBs
Position
Unknown
AA seq
1044 aa
AA seq
DB search
MCGISYFLSTRSLKMPRDIRSYFTSTTVKKSKDQSTDKSADKTVKTTVKTKKRAIISSDE
EETKSSSVVKRTKYTKKFNKHHLLSDSDDEVQISSTVNSKKVEPANNTKQESHVKDELKS
TISPIEMFSKGSVRRETIPKKIKKMKEKEDDKMLNLLPKLNTKKLEKEYLQNVKEEDNEK
DRTNNTIDDPTEKKTNRTSNEKKKNSVSIDDEISYRKKDTKQEDKSSGSKELSLTNEENN
VDTKMKNFPKKASKRPKAISTIEIESKRAKNENAPTNSSTLDEYEERIQMKKQSSMLYQK
YLNRGGARNPGSKEIPQGAEYCLAGLSFVITGVLDSLEDEEAKELIIKYGGRILHQVSRN
TDYLVVGEEYGPAKMAKANELKIKKISEDDLLELIRVRPKGKAEDIKKSRSKSKENSISK
IEHHEIPKLQKSVKETVEPVKETVEPVKETVESVKKTVEPVKETVEPLKSLETKLDSKDI
ANDVVITKGCEALVDKYRPKSTKQVLGQQGDKSCVKKLHYWLSNWHKNRNKKHARPSPWA
KNDDGAYFKATLLSGPPGIGKTTSAQVVCNELGFDLLEFNASDTRSKKLLKERVSEILSN
KTIKNFFTGENNSKHVLLMDEVDGMAGNEDRGGLQELVSLIKSTDVPIICICNDRTNPKM
KTLSNYTFDLKFPKPRLEQIRAAMKSICFKENIKISTERLDQLIESTNHDIRQVINHLSL
LIDKFENVKKTEYKPNKDLKLGPWEVVKKVFNVEEQKNMNINDKSDLFFHDYNIAPLFVQ
ENYLSVMPAAPKTELLERVAQAAESIALGDGIEKAIRSNNAWSLLPIQACFSSVIPGSMM
SGHIQNQINFPAWLGCNSRRNKFDRLLQEITVHTRLTTGVSKEAVNLDYLNHIKDAIVRP
LVNNGTEGVDEAVNVMTQYHLLREDLDSLNEVSMWPGQKNLFQAVESKVLAAFTRTYNKN
SPGLPYSITTSKTKKSAMTSQEDLESIEAVEDDINSDEEEDNINLDKMIKAKKPTVKNKK
ETEEKSSKKPTVKRGKGNNKKSNI
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggaatttcgtattttctttctacaaggagtttaaaaatgccacgtgatatacga
tcttactttacgagcactactgttaagaaatcaaaggatcagtcaacagataaatcagct
gataaaacagttaaaactacagttaaaactaaaaaaagagcaataatatcgtctgacgaa
gaggagacaaaatcatcctctgtggtaaagcgtaccaagtatacaaaaaaatttaacaag
catcatcttttatcagactctgatgatgaggttcaaatatcgtcgactgttaatagtaaa
aaagtagaaccagctaataataccaaacaagaatcacatgtcaaagatgaattgaaaagc
actatttcaccaatagaaatgtttagtaaagggtcggtgaggcgagaaaccataccgaaa
aaaataaagaagatgaaggaaaaggaagatgacaagatgttaaacttattacctaagtta
aacacgaagaaattagaaaaagaatatttacaaaatgtcaaagaagaagacaacgagaaa
gacagaacaaataatacgatagatgatccaacagaaaagaaaactaatagaacttcaaat
gaaaaaaagaagaatagtgtatccatcgatgatgaaatatcttatagaaaaaaagataca
aaacaagaagataaatcttctggtagtaaagaattgtctttaactaatgaagagaataac
gttgatacaaaaatgaaaaattttcctaagaaagcatctaaacgtcctaaagctatttcc
acgatagaaatagaatctaaaagagcgaaaaacgagaatgcacctaccaatagttcaaca
ttagacgaatacgaagaaagaattcaaatgaaaaaacaaagttcaatgctatatcagaaa
tatcttaataggggtggagcgagaaatcctggttctaaggaaattccgcagggagcagaa
tattgcttagcaggcttaagttttgtaataacaggagttttggattcgttagaagatgaa
gaagctaaagaattaataataaaatatggtggtcgtattttgcatcaagtatcgagaaat
acggattatctcgtagtaggtgaagaatatggacctgcgaaaatggctaaggccaatgag
ttaaaaatcaaaaaaatatctgaagatgatttgttagaattgatacgagtaagacctaaa
ggaaaagctgaagatatcaaaaaatctcgttcaaaatctaaggaaaattcaatatcaaag
atagaacatcatgaaataccaaaactgcaaaaaagtgttaaagaaacagtagaacctgta
aaagaaacagtagaacctgtaaaagaaacagtagaatctgtaaaaaaaacagtggaacct
gtaaaagaaactgtagaacctttgaaatctttggaaacaaaattagattctaaagatata
gcaaatgatgttgtaataacaaaaggttgcgaagcattagttgacaaatacagaccgaaa
agtacaaaacaagtattagggcaacaaggagataagagttgtgtgaaaaaattgcattat
tggttatcaaattggcataaaaatcgaaacaagaaacatgcaagacctagtccctgggca
aaaaatgatgatggagcatattttaaagctactctgttatcaggaccacctggtattggt
aaaactactagtgctcaagtagtatgtaatgaattaggtttcgatctattagaatttaat
gcttcagatacaagaagtaagaaacttttaaaggaaagagtttccgaaattctatctaat
aaaacaataaaaaatttctttacgggagaaaataatagtaaacatgtattgttaatggac
gaggttgatggtatggctggtaacgaagatcgtggaggtttgcaagaattggttagctta
atcaaatctacggatgtaccaataatttgtatttgcaatgatcgtactaatcccaaaatg
aaaactctctccaattatacatttgatcttaaatttccaaaaccgagattagagcaaatc
agggcagcaatgaaatcgatatgtttcaaagaaaatatcaaaatatctactgaaagactc
gatcaattaattgaatcaactaatcacgatattcgtcaagtgatcaatcatttgtcatta
ttaattgataaatttgaaaatgttaaaaagacagagtataaaccgaacaaggacttaaaa
ttagggccttgggaagtagttaaaaaggtttttaacgtcgaggaacagaaaaatatgaat
attaatgacaaaagtgatctcttctttcatgattacaatatagcaccattgttcgtacaa
gaaaattatctttcagtaatgcctgcagctccaaaaactgaattattagagagagtcgcg
caagctgcagagagtatagcattaggagatggcatagaaaaagcaattcgaagtaacaat
gcatggtcccttctaccaattcaagcatgtttttcttctgttattcctggtagtatgatg
tccggacatatacaaaatcaaattaattttccagcttggcttggatgtaattcaagaaga
aataaatttgatagattattacaagagataactgtacacacacgtttaactacaggtgtt
agtaaggaagcagtcaatttggattacttaaatcatataaaagatgccattgttagacct
ttagtcaataacggtactgaaggagtagacgaagcagttaatgttatgacacaatatcat
ttgttaagagaggatttagattccttgaatgaagtttctatgtggccagggcaaaaaaat
ttatttcaagcagtagagagtaaggtattagcagcatttactagaacgtataacaaaaac
tctcctgggctaccttattctattactaccagtaagacaaagaaatctgcaatgacttcg
caagaagatttagaatctatagaagctgtagaagatgatataaattcagacgaagaggaa
gacaacatcaatttagataaaatgataaaagccaaaaagccaacggtaaaaaacaaaaaa
gaaacggaagaaaaaagtagtaaaaaacctaccgtcaaacgtggaaaagggaataataag
aaaagtaatatttaa
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