Polistes fuscatus (common paper wasp): 122514445
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Entry
122514445 CDS
T07683
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
pfuc
Polistes fuscatus (common paper wasp)
Pathway
pfuc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pfuc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122514445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pfuc03041
]
122514445
Enzymes [BR:
pfuc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
122514445
Spliceosome [BR:
pfuc03041
]
Complex C
Other components
Step II factors
122514445
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
AAA_22
DEAD
GIPC1_GH2
AAA_19
nSTAND3
AAA_16
AAA_30
Motif
Other DBs
NCBI-GeneID:
122514445
NCBI-ProteinID:
XP_043487224
LinkDB
All DBs
Position
Unknown
AA seq
1197 aa
AA seq
DB search
MDEVTKLEHLSLVSKICTELENHLGLNDKDLAEFIIHLSEENNTFETFKKVLIENGAEFS
DSFIANLLRIIQHMKPSTPSNKSSLVNSCKQDELAHKFPVLALPNDVPTQSAQETEKTDK
EIVNDVLASLEALAPSNLKNNENGRKDDHKRNKRSSKDKDLEKSREKKRHRSRSNDRKDK
RRRSRSINRSRSKEREHGRRRRRRSRSSSRTSRSHGYKDSKNSRNRDRSRSRSLEELSVE
PEVGQIYTGKVANIVPFGCFVQLEGLRRRWEGLVHISQLRREGRVASASDVVTRGQKVLV
KVLNVGGQKVSLSMKDVDQETGRDLNPVVAVNKIEEDEKYLRNPDRPTSLLEIQGTWDED
ETYSRKRVQRLSSPEKWEIKQMHAASCIDRSELPEFDMETGVLPREDDEEEDVEIELVEE
EPPFLHGHGRALGDLSPVRIVKNPDGSLAQAAMMQSALAKERREQKMLQREQEMDSVPTG
INKNWIDPLPDAESRTLVANMHGIGMQTQDLPEWKKHVIGGKKSSFGKKTNLTLLEQRQT
LPIYKLRDDLVKAVTDNQILIVIGETGSGKTTQITQYLAETGFTARGKIGCTQPRRISTV
SVAKRVAEEFGCRLGQEVGYTIRFEDCTGPETSIKYMTDGMLLRECLMDLDLKTYSVIML
DEAHERTIHTDVLFGLLKQAVGKRPDLKVIVTSATLDAVKFSQYFFEAPIFTIPGRTFEV
EVMYTKEPETDYLDAALITVMQIHLREPPGDILLFLTGQEEIDTACEILYERMKSLGPDV
PELIILPVYSALPSEMQTRIFEPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKV
YNSKTGMDSLIVTPISQAAAKQRTGRAGRLGPGKCYRLYTERAYRDEMLPTPVPEIQRTN
LATTVLQLKTMGINDLLHFDFMDAPPVESLIMALESLHSLSALDNEGLLTRLGRRMAEFP
LEPNLSKMLIMSVHLQCSDEILTIVSMLSVQNVFYRPKDKQALADQKKAKFNQAEGDHLT
LLAVYNSWRNNKFSNAWCYENFVQMRTLKRAQDVRKQLLGIMDRHKLDVVSAGKNTVRIQ
KAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMRE
VTTIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLYNKYEEPNAWRISRVRRRRN
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggttacgaagttggaacatttgtctttggtatcaaagatttgtacagaatta
gaaaatcatttaggcttaaacgataaagatttagccgaatttataattcatttgtcagaa
gaaaacaatactttcgaaacatttaaaaaagttttgatcgaaaatggtgccgaattttcc
gactccttcatagcaaatttacttaggataatacaacacatgaaaccgtctactccttct
aacaaatcttcgttagttaattcatgtaaacaagacgaattagcgcataaatttcctgta
ttagctttaccgaatgatgtacctactcaatctgctcaagaaaccgaaaaaactgataag
gaaatagttaacgacgtgttagcatctttagaagcattagcaccgtctaaccttaaaaat
aacgaaaatggaaggaaagatgatcacaaacgaaataagcggagtagtaaagataaggat
ttggaaaagagtagggaaaagaaaagacatagatctagatctaatgatcgaaaggataaa
agacgtagatctagatctataaatcgttctagatccaaggaaagagaacatggtagaaga
cgcagaagaagatcaagatcctcgagcagaacgtcaagatcgcatggttataaagattcc
aagaattcaaggaatcgtgacagatctagatctaggtctttggaagaactttctgtagag
ccagaagttggtcagatttatacaggaaaagtagccaatatagtaccatttggttgtttc
gttcaattggaaggtttgagacgtaggtgggaaggattagtacatatttcacaattacga
agagaaggcagagtggctagtgcaagtgacgttgtaaccaggggtcaaaaagttcttgtt
aaagtattgaatgttggcggacaaaaagtttcattaagtatgaaagacgttgatcaagaa
acaggtagagatttaaatcctgtagtagcggttaataagatcgaagaggatgaaaaatat
ttgagaaatccagatcgtccaacatcattattggaaattcaaggtacgtgggacgaagat
gagacatattctagaaagcgtgtgcaaagattgtcttctcctgaaaagtgggaaataaag
cagatgcatgctgcgtcatgtatagacagaagtgaattgcctgaatttgatatggagact
ggagtcttacctagagaagacgacgaagaggaagatgttgaaattgaattagtggaagaa
gaacctccatttttacatggccatggaagagcgcttggagacttaagtcctgtacgtatt
gtcaaaaatcctgatggttctttagctcaagccgcaatgatgcaaagcgcgttggcaaaa
gaaaggagagagcagaagatgttacagcgagaacaggagatggattctgtacctactggc
attaacaaaaattggattgatcccttaccagatgctgaaagcagaacacttgtagccaat
atgcatggaataggtatgcaaacgcaagatctgcctgaatggaaaaagcatgtaatagga
ggaaaaaaatcttcatttggaaagaaaaccaatttgacgttactagaacaacgtcaaact
ttaccaatatacaaacttagagatgatttagtaaaggctgttactgataatcaaatttta
atcgtcattggtgaaactggttctggaaaaacaactcagataactcaatatttagcagaa
acaggatttactgctcgtggtaaaattgggtgtactcaaccacgtcgtatctcaaccgtc
tccgttgctaaaagagtagcagaagaatttggatgtcgtttaggacaagaagttggttat
accattcgatttgaagattgtactggtccagaaacaagtataaaatacatgacagatggt
atgttactcagagaatgtcttatggatctagatttaaaaacctactctgtaataatgttg
gatgaggcgcacgaaagaactattcatactgatgttttatttgggcttcttaaacaagca
gtgggtaaaagacctgatttaaaagtaattgtaaccagtgctacccttgatgctgtcaag
ttctctcaatacttctttgaagcaccaatttttactattcctggaagaacatttgaagta
gaagtaatgtatacaaaagaaccagagacagattatttggatgctgcacttataactgta
atgcagatacatttacgggagcctcctggagatattcttctgtttctgactggtcaagaa
gaaattgatacagcatgtgagattctatatgaacgtatgaaatcattgggtcctgatgtt
cctgaattaattattttgccagtctattctgcattaccttctgaaatgcaaactagaatt
tttgaaccagcgccgcctggttcacgaaaagttgttatagctacgaatattgcagaaaca
agtttaactatcgatggtatttattatgtggtcgatccaggctttgtaaaacaaaaggtt
tacaattctaaaactggtatggacagtcttattgtaactcctataagtcaagctgcagca
aaacagagaacgggaagagcgggaagattaggacctggaaaatgttacagactttatact
gagagagcgtatagagatgaaatgttaccaacacctgtaccagaaattcaaagaacgaat
ttagctaccacagtactacaattaaaaacaatggggattaatgatttgttacattttgat
tttatggacgctcctccggtagaatcgcttattatggccttagaatctttacatagttta
agcgctttagataatgaaggtctcttaacacgtcttggaagacgcatggctgaatttccc
ttagaacctaatttatccaaaatgttaatcatgagcgtacatcttcaatgttcagatgaa
atattaactatagttagtatgttgtccgtacaaaatgttttctataggccaaaggacaag
caagccttagcagatcagaaaaaggctaagttcaatcaagccgaaggcgatcatttaaca
ttgttggcagtttataattcttggagaaataacaaatttagtaatgcatggtgttatgaa
aattttgttcaaatgagaacattgaagagagcgcaagatgtacgcaaacaattgttaggt
ataatggataggcataaactggatgtagtatcggcaggaaaaaatactgttagaatacaa
aaagcagtgtgctctgggttcttcaggaatgccgccaagaaggaccctcaagaaggttac
agaactttggtagatagtcaagtagtatacattcatccaagtagtgcattatttaatagg
caacctgaatgggttatttatcacgagttagtacaaactacaaaggaatatatgagagaa
gtaactactattgatcctaaatggttagtagaatttgctccagcatttttcaaatttagc
gatccaactaaactcagtaaattcaaaaagaatcaaagacttgaaccattgtataacaaa
tacgaggaacctaatgcttggcgaatatctagagttcgtagaaggcgtaattaa
DBGET
integrated database retrieval system
