Polistes fuscatus (common paper wasp): 122516178
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Entry
122516178 CDS
T07683
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 1 isoform X1
KO
K14401
cleavage and polyadenylation specificity factor subunit 1
Organism
pfuc
Polistes fuscatus (common paper wasp)
Pathway
pfuc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pfuc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122516178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfuc03021
]
122516178
03019 Messenger RNA biogenesis [BR:
pfuc03019
]
122516178
Transcription machinery [BR:
pfuc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
122516178
Messenger RNA biogenesis [BR:
pfuc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
122516178
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF_A
MMS1_N
RGL11_C
Motif
Other DBs
NCBI-GeneID:
122516178
NCBI-ProteinID:
XP_043489722
LinkDB
All DBs
Position
Unknown
AA seq
1416 aa
AA seq
DB search
MYSICKSTHPATGVEHAITCYFFNRSEKCLVVAGSNIIRIFRLIPDVDTTKREKYIESRS
PKMKLECLAQYTLHGNVMSMQAVHLIGSQRDSLLLSFRDAKLSVVEYDQETHDLRTVSLH
YFEEEEIRDGWTNHHHIPIVRVDPEGRCAVMLIYGRKLVVLPFRKDPSLDDGDLLDTAKL
TTSNKTPILSSYMIVLKSLEEKMDNIIDLQFLHGYYEPTLLILYEPVRTFSGRIAVRQDT
CAMVAISLNIQQRVHPIIWSVSNLPFDCYQAVPVKKPLGGTLIMAVNSLIYLNQSIPPYG
VSLNSLADTSTNFPLKPQEGVKMSLEGAQVAFISPDRLVISLKSGELYVLSLFADSMRSV
RGFHFDKAAASVLTSCVCMCEDNYLFLGSRLGNSLLLRFTEKEQENEQNQIDNDVMVEDN
ESEETPAKKIKQDFLGDWMASDVLDIKDPEELEVYGSETHTSIHITSYIFEVCDSLLNIG
PCGNISMGEPAFLSDEFSHNQDPDVELVTTSGYGKNGALCVLQRSIRPQVVTTFELPGCE
DMWTVIGNLNNDNQTKTESEGSHAFLILSQEDSTMILQTGQEINEVDQSGFSTQGSTIYA
GNLGANRYIVQVTQMGIRLLQGIEQIQHMPLDLGCPIVHASCADPYVTILSEDGQVMLLT
LREGRGSARLHAQAANLLFRPQIEALCAYRDVSGIFTTQLSENSDDDIPEEEHNVEEPPI
VNNIDNEDDLLYGDAPAFQMPVPPHTKNIDGTTKKALWWQKHLQEIKPTYWLLVYRDNGT
LEIYSLPDLRLSYLIRNFGYGQYVLHDSMESTTLQTNPVNEIPNPENQVREILMVALGHH
GNRPMLLVRLDTELQIYQAYKYPKGHLKLRFSKLHHGIIPGHLRPKPKEEDMPNMNQAKI
SMMRYFSNIAGYNGVFICGDYAHWIFLTGRGELRTHPMSIDGPVTSFAPFNNINCLQGFL
YFNRKEELRICVLPTHLSYDAPWPVRKVPLRCTPHFVTYHLESKTYCVITSTAEPLKSYY
RFNGEDKEFTEEERPDRFLYPSQELFSIVLFSPVSWETIPNTKIELDQWEHVTCLKNVSL
AYEGTRSGLKGYIVLGTNYNYGEDITSRGRILIFDIIEVVPEPGQPLTKNRFKQIYAKEQ
KGPITAITQVSGFLVSAVGQKIYIWQLKDNDLVGVAFIDTQIYIHQMLSIKSLILVADVY
KSISLLRFQEEYRTLSLVSRDFRPAEVYTIEYLIDNNNLGFIVADGESNLALFMYQPESR
ESLGGQKLIRKADFHLGQKVNTFFRIKCRVTDPANEKKYFSGADKRHVTMYASLDGSLGY
ILPVPEKTYRRLLMLQNVLVTHICHIAGLNPKAYRTYKSYIRTQGNPARGIIDGDLVWSY
LNLPNNEKMDVAKKIGTRVQEIIEDITEIDRQTAHF
NT seq
4251 nt
NT seq
+upstream
nt +downstream
nt
atgtattcgatatgtaaaagcactcatcctgcaacaggagtagaacatgcgatcacatgt
tatttttttaatcgttctgaaaagtgtcttgtagttgctggttctaatattataaggata
tttcgtttaattcccgatgtggatacaacaaaaagagaaaaatatatagaatcacgttct
ccaaaaatgaagctagaatgtttagcacaatatactttacacggaaatgtaatgtcaatg
caagcggtacatttaattggatctcaacgggattctctcttgttgagtttccgtgatgca
aaattgtctgttgttgaatacgatcaagaaactcatgatcttagaacagtatctttgcat
tattttgaagaagaagaaatacgggatggttggacaaatcatcaccatataccaattgta
agagtagaccctgaaggtcgctgtgcagtgatgttgatatatggacgtaaattagtagta
ctaccattccgtaaggatccaagtcttgatgatggagatttattagatacagctaaatta
actacatctaataaaacgcctatactgtcgtcgtatatgattgtattaaaaagtctggaa
gaaaaaatggacaatattatagatttgcaatttttacacggatactacgaaccaactttg
ctgattctttatgaaccagtaagaacattttcaggacgtattgcggtaagacaagatact
tgtgcaatggtagcaatatcattaaatattcaacaaagagttcatcctattatatggtct
gtttctaatttaccatttgattgttatcaagcagtaccagtgaaaaaacctcttggtgga
acattaataatggcagtgaattctttaatttatttgaatcaaagtattccaccatatgga
gtatctcttaatagcttagcagatacaagtacaaattttcctttaaaaccacaagaagga
gttaaaatgagtttggaaggtgctcaggttgcatttatatctccagatcgtttggttatc
tctttaaaaagtggagaactgtatgtactgtccttgtttgcagatagtatgcgttcagta
cgcggttttcattttgataaagcagctgccagtgttttaacatcatgcgtatgcatgtgc
gaagataactatcttttccttggctcgcgtcttggtaattcattattattaaggttcact
gaaaaagaacaagaaaacgaacaaaatcagattgataatgatgtcatggttgaagataat
gaaagcgaagaaactccagcaaaaaaaataaaacaagattttcttggtgattggatggca
tccgatgtattagatatcaaggatccagaagaattagaagtctatggaagtgaaacgcat
acatctattcacataacgtcttatatctttgaggtatgcgatagcttgttaaatatagga
ccttgtggaaatatatctatgggagagccagcatttttatcagatgaattttcacataat
caagatcctgatgttgaattagttacaacatcgggatatgggaaaaatggtgctctttgc
gttctccaaagatctattcgacctcaggtagtaacaacatttgaattacctggatgcgag
gatatgtggactgtcattggcaatctaaataatgataatcaaacaaaaaccgaatcggaa
ggttctcatgcttttttaatattaagtcaagaagattcaactatgattctacaaactggt
caagaaataaacgaagttgatcaaagtggattcagcactcagggaagtacaatttatgca
ggaaatcttggtgctaacagatacatagttcaagttacgcaaatgggaattcgtctttta
caaggaattgaacagatacaacatatgcccttggatcttggatgtccgatagttcatgct
agttgcgcagatccatatgtaactatactttcagaagatggtcaagttatgttacttaca
cttagagaaggaagaggttcggcaagattgcatgcacaagctgctaatttactattccgt
ccgcaaatagaagcactctgcgcatatagagatgtaagtggaatattcacaacacaatta
tctgaaaattcggatgatgatataccagaggaagaacataatgtagaggaaccacctatt
gttaacaatattgataatgaagatgacctgttatatggtgatgcaccagcttttcagatg
cctgtaccacctcatactaaaaatattgatggaacgaccaaaaaagcactatggtggcaa
aaacatttacaagagattaagcctacgtattggttactagtatatagagataacggaacc
ttagaaatttattctttgccagacttacgtttatcctatcttattcgtaattttggttac
ggacaatatgttttacatgatagtatggaatctacaacattgcaaactaatcctgtcaat
gaaattcctaatccagaaaatcaagtacgtgaaattttgatggtcgctttaggccaccat
ggaaacagaccaatgcttttagtacgcttagatactgaattgcaaatttatcaagcttat
aaatatcccaaaggacacttaaaattgcgatttagcaaattacatcatggtattatacca
ggtcatttaaggccaaaacctaaagaagaagatatgcccaatatgaatcaagcaaaaatt
tctatgatgcgatactttagcaatattgctggatataacggagtattcatttgcggtgat
tatgcacattggatatttcttactggacgtggtgaattacgaacacatccaatgagcata
gatggtcctgttacttcttttgcaccatttaataacatcaactgccttcaaggtttttta
tatttcaatagaaaggaagaattaaggatatgcgttctaccgacacatttatcatacgat
gcaccatggcctgttagaaaagtacctttgcgatgtactccacactttgtgacttatcat
ctcgagagtaaaacttattgtgttataacgagtacagcagaaccacttaaaagttattac
agatttaatggcgaagataaggaattcacagaggaagaaagacctgatagatttctttac
ccgtcacaagaattatttagtattgttttattttccccagtttcttgggaaactatacca
aatactaaaattgaattggatcaatgggaacacgtaacatgtttaaaaaatgtgtcttta
gcgtacgagggaacaagatctggattaaagggttacatcgtattaggaacaaactataat
tatggtgaagatattacgagtagaggacgtattcttatatttgacattatagaagtagta
ccagaacccggacaaccattaacaaaaaataggtttaaacagatttatgcaaaggaacag
aaaggtcctataactgctattactcaagtatcaggatttctagtttcggcagtggggcaa
aagatctacatttggcaattaaaagataacgatcttgtaggcgtagcttttatagatact
caaatttatatacatcaaatgttgagtattaaaagtttaattttagtcgctgatgtgtac
aaatcaattagtttattaagatttcaagaagaatatagaacactttcccttgttagtaga
gattttcgtccagcagaagtctatacgatagaatatttaattgataataacaatttaggt
tttatagtagctgatggagaaagtaatttagctctgtttatgtatcaaccagagtcaagg
gaaagtcttggtggacaaaaattgattagaaaagctgacttccatttaggacaaaaagta
aatacattctttcgaattaaatgtagagttactgatcctgcgaatgaaaagaaatatttt
tctggagcagataaaaggcacgttaccatgtacgcatccctggatggtagtcttggttat
attcttccagttccagaaaaaacatatcgtagattacttatgcttcaaaatgtgttggtc
acacacatatgtcatatcgcgggtctaaatcctaaagcatatcgaacatataaaagttat
ataagaacgcaaggtaatccagccagaggtatcattgacggagatttggtttggagttat
ctcaatttacctaacaatgaaaaaatggatgtagccaaaaaaattggaacgcgagttcaa
gaaataatagaagatattacagaaattgatcgccaaacagcacatttttaa
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integrated database retrieval system
