Polistes fuscatus (common paper wasp): 122516387
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Entry
122516387 CDS
T07683
Name
(RefSeq) pre-piRNA 3'-exonuclease trimmer-like isoform X1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
pfuc
Polistes fuscatus (common paper wasp)
Pathway
pfuc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfuc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122516387
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfuc03019
]
122516387
Enzymes [BR:
pfuc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
122516387
Messenger RNA biogenesis [BR:
pfuc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
122516387
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
122516387
NCBI-ProteinID:
XP_043490082
LinkDB
All DBs
Position
Unknown
AA seq
533 aa
AA seq
DB search
MIEVTKENFTEIYPQLKNDLENADVIAIDTEFTGLECDEISKISLFDTIEERYENLRNTL
EPFIIIQFGITTLKKIHDKNEFIPKSYEFYLLPKSVFTKNKIISWQISVIEFLSYYSFNF
NKVINHGISYVNQIEEAILNEQWKNNTLYKNVEESMSYKEKDDVNHFSSMIAEWLKNLNN
KEIYTIPAFTDKFQYFLQKTLRERFRNIWTICNKQTVQVFKISSDVREMLENEKEQSLEH
ILLNSYIGFSNVFKLLVELKKPIIGHNILLDLMFMHKLFYKPLPRRYCDFKTEINNLFPI
IYDTKYISNQVKEKYEIQVLNSLGSLYCHFSNLAKTFPHIADYTNNTSKNFHNAGWDSYC
TGYIFLKMAYMFANDKYPLSFNYVITHEELMSLIQEYANCINLSNANALYLKLDGKDPKW
GRPPWLFLKTRESTHLDINEISKELSQFGIFDIKPYNRGRALIAVANHTSAYDILKHFHN
NKELSIVRYNPIKHAPSMKYLLLGSVLVSSGMLAWIYHRSVSPKLSDRDLSCQ
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaagtcacaaaagaaaattttacagaaatatatccgcaattaaaaaatgattta
gaaaatgcagatgtaattgctattgatacagaatttactggcttggaatgtgatgaaatt
tctaaaataagcttgtttgatactattgaagaacgatacgaaaatttacgaaatacactt
gaaccatttataattattcaatttggtattactacgttaaaaaaaattcatgataaaaat
gaatttattccaaaatcttacgaattttatctactacctaaatctgtttttacgaagaat
aaaataatctcatggcaaatttcagtaatagagttcttatcttactactcctttaatttt
aataaagtaattaatcatggtatctcatacgttaatcaaattgaagaagctatactaaat
gaacagtggaaaaataatacattgtacaaaaatgttgaagaaagtatgtcatataaagaa
aaagatgatgttaatcatttcagttctatgatagctgaatggttaaaaaatttgaataac
aaagaaatttacactattcccgcatttactgataaatttcagtattttttacagaaaact
ttaagagaacgttttcgaaatatttggaccatatgtaataagcaaacggtacaagtattt
aaaatatcatcagatgtacgggaaatgttagaaaacgaaaaagaacaaagcttagaacat
attttgttgaattcatatataggattttcaaacgtatttaagctcttggtagaattaaag
aaacctattattggacataatatcttactcgatttgatgttcatgcacaaattattttac
aaacctttaccaagaagatattgtgacttcaagactgaaataaataatttatttcctata
atttacgatactaaatatataagtaaccaagtaaaagaaaaatacgaaatacaggtttta
aattcacttggttctctttattgtcattttagtaacttggcaaaaacgtttccacatata
gccgattatacaaataatacatcaaagaattttcataatgcaggatgggattcgtattgt
actggatacatatttttaaaaatggcatatatgtttgctaatgataaatatccattgtca
ttcaattacgtcataacccatgaagaattaatgagtttaatacaagagtatgcaaattgt
ataaacttatcaaatgctaatgcactttatttgaaacttgatggtaaagatccaaaatgg
ggaagaccaccgtggctgtttttaaaaacacgagaatcaacccatttagatataaatgag
atttcgaaagaattatcgcagtttggaatttttgatataaaaccttacaatcgtggacgt
gctttgatagctgttgcgaatcatacgagtgcgtatgacattttaaaacattttcataac
aacaaagaattaagtatcgttcgttacaatccaataaaacatgctccatctatgaagtat
cttcttttaggtagcgtgctcgtatcgagtggaatgttagcttggatatatcatcgttct
gtatccccaaaactttctgatcgtgatctttcctgccaataa
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