Polistes fuscatus (common paper wasp): 122516843
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Entry
122516843 CDS
T07683
Name
(RefSeq) exosome complex exonuclease RRP42-like
KO
K12589
exosome complex component RRP42
Organism
pfuc
Polistes fuscatus (common paper wasp)
Pathway
pfuc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfuc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122516843
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfuc03019
]
122516843
Messenger RNA biogenesis [BR:
pfuc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
122516843
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
122516843
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
DDE_Tnp_4
Motif
Other DBs
NCBI-GeneID:
122516843
NCBI-ProteinID:
XP_043490964
LinkDB
All DBs
Position
Unknown
AA seq
291 aa
AA seq
DB search
MTTIPLSLGEKTFILHGVDADLRNDGRKRCEYRTFEIETNLMEQTHGSSRLRIGNTDILV
SVKVEIDSPYIDRPNEGKLEFFTDCSANATPEFEGKGGDDLATEISNILSLSYQTPAAFN
LKDLCILPSKKCWKMFVDILILQCGGNLFDAVGLAVKAALYSTEIPRVTAATFDGGEAEV
QISDDPFDCIKLNITNYPIIVTLCKIGENCVIDPTSEEEMCSPVSTIVSITPNGNITSIV
KIGYGSMQDTTLFKMLEMGKTVALKLNDELMSALKKEAELGPTRPIVGFLR
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgactacaattccattgagtttaggagaaaaaacgtttattcttcatggagtggatgca
gatcttagaaacgatggaagaaaaagatgtgaatatcgaacatttgaaatcgaaactaat
ttgatggaacaaacacatggttcttcaagattgcgaataggaaatactgacattcttgtc
agcgttaaagtagaaatagattcaccgtacattgatcgaccaaatgaagggaaattagaa
ttctttacagattgttctgcaaatgctacgccagagtttgagggtaaaggcggagatgat
ttggcaacagaaataagtaacattttatctttatcttatcagacaccggctgcatttaat
ttaaaagatttgtgtattttaccaagtaaaaaatgttggaaaatgtttgttgatattttg
atattacaatgtggtgggaatctttttgatgctgtaggtttagctgtaaaagctgcttta
tacagtacagaaataccaagggtaactgctgcaactttcgatggtggagaagccgaagta
caaatatcggatgatccttttgattgcattaaattaaatattactaactacccaattatt
gtcactttgtgtaaaataggagaaaattgtgtgatagatcctacttcagaagaagaaatg
tgtagtccagtgagtacaattgtatctataacgcctaatggtaatatcacatcaattgtc
aagataggatatggcagtatgcaggatacgacattatttaaaatgctcgagatgggtaaa
actgttgcgcttaaattaaatgatgagcttatgagtgcattaaaaaaggaagcagaactt
ggaccaacgagacctatagttggatttcttagataa
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