Polistes fuscatus (common paper wasp): 122518207
Help
Entry
122518207 CDS
T07683
Name
(RefSeq) transcription elongation factor SPT6 isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
pfuc
Polistes fuscatus (common paper wasp)
Brite
KEGG Orthology (KO) [BR:
pfuc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfuc03021
]
122518207
03036 Chromosome and associated proteins [BR:
pfuc03036
]
122518207
Transcription machinery [BR:
pfuc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
122518207
Chromosome and associated proteins [BR:
pfuc03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
122518207
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
S1
Tex_central_region
SH2
HHH_9
HHH_3
Tex_YqgF
Spt6_S1
HTH_10
S1_RRP5
OB_RRP5_4th
Tex_N
Motif
Other DBs
NCBI-GeneID:
122518207
NCBI-ProteinID:
XP_043492909
LinkDB
All DBs
Position
Unknown
AA seq
1760 aa
AA seq
DB search
MADFLDSEAEESEEEELDQNEKKKLKKMKAVEESDEEDDDDGEEVADLIDDNPIEEESDG
EDSDTSGGSKKRKKSDDEFDDRLEEEDYDLIEENLGVKLERKRRFKRLRRIQDEESEDEQ
EKEPEEDRDAIATELFEGSGDERDVFVEEERRSERSHRPEVETLDEEGSEGDDDMNDFIV
DEDGRSLAEKRLKKKPIFSDAALQEAQDIFGVDFDFDEFGKFGEEDYEEEEEEEEEDEYL
DDDVDERPRRPKKQFKKKSTRKSIFEIYEPSELKRGHFTDLDNEIRNTDIPERMQLRSVP
VTPVAEGSDELDLEAEWIYKQAFCRPTISVQDAHLNEEAKERAKKGPQTIGKIKKALDFM
RNQHFEVPFISFYRKEYVLPELNINDLWKVYKFDAKWCQLRQRKDNLLRLFKKMRNYQLD
EIMKNPDAPLPDNVRVIKDDDVERLKNIQTSEELNDVYQHFMLYYSHDIPAMQEIVRQKE
REARREARIQKRKQQIAEAEENGEILPEEDIELAAEEEDEPDETLKQAVRSGPYSTCRKA
GLDALAKKFGLTPEHFAENLRDNYQRHEVDQEPIEPTTVANDFCSSRFHTPEEVLKAAQL
MVAMQLAREPLVRKCVREMYMERAKISVKPTKKGIKEIDENHPIYSMKYLKDKPVRDLVG
DQFLKLIIAETDKLITISLSDTIEGNTTSNYVDEMKQLYYRDEFSKNVQDWNTLRVGSVE
MALNRMVIPHLKKELRINLVTEAKECIMRACCRKMYNWIKVAPYTCEFPEEEDEEWDTSK
GLRVMGLAYVPDYSQAAFTCIVSADGECTDYVRLPHLMKRKNSFRDDEKVMKEADLLALK
NFIATKKPHVVVIGGESREALMIASDVKECISNLMEDEQFPTIQVEICENELAKIYSNSN
KGISEFRDYPELLRQAISLARRMQDPLVEFSQLCTADEEILCLKYHPLQDQLLKEELLEN
LYLEFVNRVNEVGVDVNKAVQQAYSGNLVQFICGLGPRKGQALIKILKQTNQRLENRTQL
VTACHMGPKVFINCAGFIKIDTNSLGDSTEAYVEVLDGSRVHPETYEWARKMAVDALEYD
DEDANPAGALEEILESPERLKDLDLDAFAEELERQGFGNKCVTLYDIRAELNSRYKDLRV
PYQSPSPEKLFDILTKETPETFYIGKLVLATVVGISHRKPQGEQLDQANPVRNDETGLWQ
CPFCLKNDFPELSEVWNHFDAGACPGKATGVRLRLDNGISGYVHIKNLSDKHVANPEERV
GIGQVIHCRIIKIEVERFSVECTSKSSDLADKNHEWRPQRDIYYDTETHDQDVKVEEDAK
KVKQLQTYVRRVIIHPSFHNISFAESEKLMQTMKQGEGIIRPSSKGADHLTVTWKVTDNI
YQHIDVREEGKENAFSLGHSLWIGNEEFEDLDEIIARHVNPMAAYTSELLDFKYYKANVE
GVKDKAEEILKEQKKQNPGGIPYIISAAKNYPGKFLLSYLPRIRCRHEYVSVLPDGFKFR
GQTFSRVNDLFRWFKEHFRDPIPGQSTPGTPHGALTSRTPYHATPGAVTGMNQDAIQRVA
QNLPHHMLHSLSQVANQTPHHYPPHTPGAASTTAYGGMHTYPNTPYTPSGQTPFMTPYQT
PHHTPRHAQQTPNHHQGPFLHPVSSSVPSTTQRSMRSSHRPTPSVSTPSSGDATDWSKAA
EAWARLKQSTPRGSGSTPRYEESRKTPRNYEDSTGRTTPRNRTPSNRTPSYKSPRGTPYT
NSSPRSMSLSGDGTPLYDES
NT seq
5283 nt
NT seq
+upstream
nt +downstream
nt
atggcagacttcttagattccgaagcagaagaaagcgaggaggaggagcttgatcagaat
gaaaaaaagaagttaaaaaagatgaaggcggtcgaagaaagcgacgaggaagacgacgat
gatggcgaagaagtcgcagatttgatcgatgataatccgatagaagaagaaagcgatggg
gaggatagtgatacttctggaggttctaaaaaaagaaaaaagagtgacgatgaatttgat
gatagattggaggaagaagattatgatttgatcgaagaaaacttgggtgttaagctcgaa
aggaaacgcagatttaaacgtcttagaagaatacaagacgaagaatccgaagatgaacag
gaaaaagaacctgaagaggatcgagatgccattgccactgaactatttgagggctctggt
gatgaaagagatgtctttgtggaagaagaacgacgaagtgaacgcagtcaccgaccagag
gttgagaccctggatgaagaaggaagtgaaggagatgatgatatgaatgattttatcgtt
gatgaggatggaagatctctcgcagaaaaacgtttgaaaaagaaaccaatattctctgac
gcagctttgcaagaagcacaggatatatttggagttgattttgactttgatgagtttggt
aaattcggagaggaagattatgaggaagaggaagaggaggaagaggaagatgaatatttg
gatgacgatgttgacgaaagaccaagaagaccgaagaaacaatttaaaaagaaaagtact
agaaagagtatttttgaaatttatgagccaagtgaattgaaaagaggccatttcacggat
ttagataatgagattcgtaatacagacattcccgaacgaatgcagcttcgttctgttcct
gttacacccgtagctgaaggttctgacgaattagatcttgaggcagaatggatatataaa
caagcattttgccgacctactatttccgttcaagatgctcacttgaacgaagaagccaaa
gagagagccaaaaaaggcccacaaactattgggaaaattaaaaaagctttagatttcatg
cgaaatcaacacttcgaagttcctttcatctcattctacagaaaagaatatgtgcttcca
gaacttaatatcaatgacttatggaaagtatataaatttgatgctaaatggtgtcaattg
cgtcaacgaaaagataatttattgagactgtttaaaaagatgagaaattatcaattggac
gaaattatgaaaaaccctgatgctccgttaccagataacgtaagagtgataaaagatgat
gacgtggagcgccttaaaaatattcaaactagcgaggaattaaatgacgtttatcaacat
ttcatgctttactatagtcatgatataccagctatgcaagaaattgttcgtcaaaaagag
agagaagcacgtcgtgaagctagaatacaaaaaagaaaacaacaaattgctgaagccgaa
gagaatggtgaaattctgcccgaagaggatatcgaacttgctgcagaagaagaagatgaa
ccggatgaaacgttgaaacaagcagttagaagtggaccatactctacttgtcgaaaagca
ggcttggatgcgcttgctaagaagtttggtcttactcctgaacattttgcagaaaatctt
cgagataattatcagcgtcacgaagtggatcaagaacccatagagcctacaacagttgca
aatgatttttgcagttcaagatttcatactccagaggaagttcttaaagctgctcaattg
atggttgctatgcaattggcccgcgaaccattggtacgcaaatgcgtccgagaaatgtat
atggagagagctaaaatatcagttaaacctacgaagaaaggtatcaaagagatagacgag
aatcatcctatctattctatgaaatatttgaaagacaaaccagttcgggatctcgtggga
gatcaattcttaaaattgatcattgccgaaacggacaaactcattactatttcattgagt
gacacgattgaaggaaatacgactagcaattacgttgacgaaatgaagcaactttactat
cgtgacgaattcagcaaaaatgtacaagattggaatactttgagagttggcagtgtagaa
atggctctcaatcgtatggtgataccacatttgaagaaggaattgaggatcaatcttgtt
acagaagcaaaagaatgcataatgagagcttgttgtcgtaaaatgtataattggattaaa
gtagctccatacacttgtgaatttcctgaagaagaagatgaagaatgggacacgagtaaa
ggtcttcgagttatgggtttagcttatgtacctgattattctcaagctgcttttacatgc
atcgtttccgctgacggtgaatgcacggactacgtaagattaccacatttgatgaagagg
aaaaatagtttcagggatgacgaaaaagtcatgaaagaagctgatttattggcccttaag
aatttcatcgctactaagaaaccccacgtggttgtaatcggtggtgaatcgagagaggca
ttaatgattgcctctgatgtaaaggaatgtatttcgaatctaatggaagatgaacaattt
cctactatccaagtggaaatatgtgaaaacgaacttgctaagatttattccaacagtaac
aagggtatttccgaattccgagattatccggaattattgaggcaagctatatctttggca
agaagaatgcaggatccgttggtagaattttctcaattatgcactgctgatgaagaaata
ttatgcctcaagtatcatccattgcaagatcagcttctcaaggaagagcttttagaaaat
ttatatttagaattcgtaaacagagtaaatgaggttggcgttgacgttaataaagcagtg
caacaagcttattctgggaatctagtacaattcatttgcggtttaggtcccagaaaagga
caagcattgattaaaatattgaaacaaacgaatcaaagattagaaaatagaactcaactt
gtaacagcttgtcatatgggacccaaagtatttatcaattgtgctggatttattaaaatt
gatacgaatagtttaggagatagtacggaagcgtacgtagaagtattggatggttcgaga
gtgcatcctgaaacgtatgaatgggcaaggaaaatggcagtagatgcattggaatacgac
gacgaagatgcgaatccggctggtgctttagaagaaattttagaatcgcctgaaagattg
aaagatttggacttggatgcatttgcagaagaattagaaagacaaggttttggcaataaa
tgcgttaccttgtatgatatcagagctgaattgaattcaagatacaaagatttacgtgta
ccgtaccaatctccgagtcccgaaaaattatttgacatattaactaaagaaacacctgaa
acgttctacatcggtaaattggtattggcaacggtggttggcataagtcatagaaaacca
caaggagaacaattagatcaagccaatccagtcagaaacgatgagactggtttatggcaa
tgtccgttctgtcttaagaatgattttcctgagctttcggaagtgtggaatcacttcgat
gcaggagcttgtccaggaaaagctacaggtgtaagactgagattagacaacggaatatcc
ggttatgttcatattaaaaatttatctgataaacatgttgccaatcctgaagaaagagtt
ggtattggtcaagtaattcattgtcgtattattaaaatcgaagtagaacgcttcagtgtc
gaatgtacgagtaagagcagcgatctggcagacaaaaatcacgaatggaggcctcaaagg
gacatttattatgacacggaaacgcacgatcaagatgtcaaagtagaagaggatgctaag
aaagtaaagcaacttcagacatacgttaggcgtgttattatacatccgtctttccacaat
attagtttcgccgagtcggagaagttaatgcagactatgaaacaaggagaaggcataata
agacccagtagcaaaggtgcggatcatcttaccgtaacatggaaagtaaccgacaatatt
tatcaacacattgatgtaagagaagaaggcaaagaaaatgcattttccttgggccatagc
ctatggataggaaacgaagaattcgaagatctcgatgaaataattgccagacacgttaat
ccgatggctgcctatacttcggaattgttagactttaaatattataaagcaaacgtggaa
ggtgtgaaagataaggctgaagagattttgaaagaacagaagaaacaaaatccaggagga
attccgtacattatatctgcagctaagaattatccaggaaaattcctcctgtcttattta
ccaagaattcgatgccgtcacgaatacgttagcgttttaccagacggctttaaatttaga
ggacaaacgtttagtagagtaaatgatttgttccgttggtttaaagaacatttccgtgat
ccaatacctggtcaatcaacaccaggtactccacacggtgctttgacttcaagaacaccg
tatcatgctactcctggggcagttacaggaatgaatcaggatgcaatacaaagagtggcc
caaaatttaccacaccacatgttgcattccctttcgcaagtagcgaatcaaacaccacat
cattatccaccacatactccaggtgcagcaagtaccacagcttatggtggaatgcataca
tacccaaatacaccttatactccttcgggacaaactccgttcatgacgccgtaccaaaca
cctcatcatactccgcgacatgcgcagcagacaccaaatcatcatcaaggtccattctta
catccggtatcttcatcggtaccatctacaactcaaagatcaatgcgatcatctcataga
cctactccatctgtgtcaacaccgtcatctggagatgccacggattggagtaaggcagct
gaagcttgggctcgtttgaaacaatccactcctcgaggatcgggtagtactccgagatat
gaagaatctcggaaaacgccacggaattatgaggactctactggaaggactactccgaga
aatagaactccatctaatcgaaccccatcctataaatcaccgcgaggaacaccgtatacc
aattctagtccgcgcagtatgtctcttagtggagatggtacaccattatatgatgaaagt
taa
DBGET
integrated database retrieval system
