Polistes fuscatus (common paper wasp): 122519323
Help
Entry
122519323 CDS
T07683
Name
(RefSeq) helicase SKI2W
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
pfuc
Polistes fuscatus (common paper wasp)
Pathway
pfuc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfuc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122519323
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfuc03019
]
122519323
Enzymes [BR:
pfuc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
122519323
Messenger RNA biogenesis [BR:
pfuc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
122519323
mRNA degradation factors
3'-5' decay
Ski complex
122519323
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
Ski2_N
DEAD
DEXQc_Suv3
Helicase_C
ResIII
MTR4_beta-barrel
ATPase_2
DUF3067
Motif
Other DBs
NCBI-GeneID:
122519323
NCBI-ProteinID:
XP_043494630
LinkDB
All DBs
Position
Unknown
AA seq
1198 aa
AA seq
DB search
MDQKYDFPPIWPNINTILNEYVECSEQLPIHQIDFAQCYWPRKPDVFSLLNYELSPHGTT
LKFDRDPITGCLGQMQEIILEEVGKNSKNSMSMKRIPGAVTDDIRGKITNIPFWPGGFDE
PVVLDETTEDIDFERNLRTLPEGFSSGIEFEADNITPKKKEKFVDVSKPERQFIDDTTNK
INLMALVEEEECKLDWPNIEESKEEMKKKNDVEKTVEISKTDSNPLPSEKLEISVLKISN
ELQSNKIEEMEWAEQIDVSVPVTDYKTKIPDPAMTFEYELDTFQKQAILKLEENCNVFVA
AHTSAGKTTVAEYAIALTQKHLTKVIYTSPIKVLSNQKFRDFKKKFDSVGLITGDVQINE
NASCLIMTTEILKSMIYGASEVLRDLEFVIFDEVHYINNEDRGHVWEEIVILLPQTVNIV
MLSATVPKPIIFANWVGRIKKRKMYVISTLKRPVPLKHYLFIPNNTKSRGELLTILDENE
EFLLNGWHAATKKFQKHDLYDFVHFLSRNDKLPVVVFTLSRKRCDTNANKLKNITLTNHA
EKMQVRSFFEHTMKYLKGTDKHLPQVCMMQNLLERGIGIHHSGILPILKETVEILFQMGV
VKLLFATETFAMGVNMPARTVVFDSIKKYDGNVFRMLLPTEYIQMAGRAGRRGHDTTGTV
IIMCHKEIPHFTELRPLMKGESKTLESQFKVTYSMVLNLRRTNELVTVQSMMRRSFKESC
LVLKEDKYQTDLNKIEEELASLPPLTDVQKELSNFYEIAMNYLQELRYLKPFMLENKQAK
KSLSKGRVVIVSYKNHFRKLGVLLGVISSKVFGNQYQVFVLKDGNQQEVKNDRHSDNSDN
EINKEKSENWYNIIALTKKTYFIPCGAPSHEVIIISPWNLIEITNHLLKIDCNMVLKDWE
KRQIFRFRNDKPGPTCQAVVQELMAISVHSKKNNDILSPYVKWKVPENLNPRFIHLRKQM
QALEKIKCTDIPNFEEQFEVVFHRMELYRKQKKLQLKLSDEGLSLYPDYINMVALLKRLG
YIDNDERVALKGRVALQMGVNELILTELILKNVLTPLQPAKIAALLSAVIYQQKDEEFSL
PPNFNHLKRESVVLYNLHQDLHKLEQEYHLNTLQPLNFSLMEAVYEWAQAKSFAEIMQKV
DVQEGIIVRVIQQLNETLQDMKNAAVAIGDPVLKGKMEEASTAIKRDIVFAASLYIQE
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atggaccaaaaatatgatttcccaccaatttggcctaacataaataccatattaaacgag
tatgtggaatgctctgaacagcttccgatacatcaaattgattttgctcaatgttattgg
ccaagaaaacctgatgttttttctttattaaattatgaattatcaccgcatggcacaaca
ttaaaatttgatcgtgatccaataacagggtgtcttggacaaatgcaagaaattatctta
gaagaagtaggaaaaaattcgaaaaattcaatgtcaatgaaacgtatacctggagccgtt
acggatgacattagaggtaaaattactaatataccattttggcctggcggtttcgatgaa
cctgttgtattggatgagacgacagaagatattgattttgaaaggaatttaagaacacta
ccggaaggattcagttctggtatagaatttgaagctgataatattacgccaaagaagaaa
gagaaattcgttgatgtatcaaaaccagaaagacaatttatagatgatacaacaaataaa
attaatttaatggctctcgtagaggaagaagaatgtaagcttgattggccaaatatagaa
gaatctaaagaagaaatgaaaaagaaaaatgatgtagagaaaactgtagaaatatctaaa
acagatagtaatccattaccatcagaaaagctagaaatatcagttttaaaaatttctaat
gaattacaatcaaataaaattgaggaaatggaatgggcagaacaaatagatgtatctgta
ccagtaacagattataagacaaaaattcctgatccagcaatgacatttgaatatgaatta
gatacttttcaaaagcaggcaatacttaagttagaagaaaattgtaatgttttcgttgcg
gcgcacacatctgcaggaaaaactaccgttgctgagtatgctatcgcattaactcaaaaa
cacttaactaaggtaatttatacttctcctataaaagtactctcaaatcaaaaattccgt
gattttaaaaaaaaatttgacagcgttggattaataacaggagatgttcaaatcaatgag
aacgcatcttgtcttattatgaccacagaaatattaaaatcaatgatatacggggcatca
gaagttcttagagatttggaatttgtaatatttgatgaagtacattacattaataatgaa
gatcgtggtcatgtatgggaagaaattgtgattcttttaccacaaacagtaaatatagta
atgttgtcagcgactgtgccgaaaccgataatatttgcaaattgggttggtcgtataaaa
aagcggaaaatgtatgtaatcagcacattgaaaagaccagtaccattgaagcattatttg
tttattcctaataatactaaaagtcgaggcgaattacttacaattcttgacgaaaatgaa
gaatttttattaaatggatggcacgcagcaactaaaaaatttcaaaagcatgacttatat
gattttgtacattttttaagcagaaatgacaaattacctgtcgttgtattcacattgtct
aggaaacgttgcgatactaatgcgaataaattaaaaaatattacgttaactaatcatgct
gaaaaaatgcaagttagatcattcttcgagcatactatgaaatatttgaaaggtactgac
aaacatttaccacaagtttgtatgatgcaaaatcttttagaaagaggcattggtatacat
cacagtgggatattacccattttaaaggaaactgttgaaattcttttccaaatgggtgtt
gttaagttattatttgcaactgaaacatttgctatgggagttaatatgccagctcggaca
gtagtattcgattcaataaaaaaatatgatggcaacgtatttcgaatgttgcttcctacc
gaatatattcaaatggctggacgtgccggtcgaagaggccacgacacaactggaacagtt
attataatgtgtcataaagaaattccacattttactgaattaagacctttgatgaaaggt
gaatcaaaaacgctggaatcacaatttaaagtaacatattctatggttttaaatttgaga
agaactaatgaattagttactgtacaatctatgatgcgaagatcatttaaggaatcatgt
ttagttttaaaagaagataaatatcaaactgatttaaataaaatagaagaagagttagca
agtttaccaccattaacggatgtacagaaagaattatctaatttctatgaaatagcaatg
aattatttacaagaattacgttatttgaaaccttttatgcttgaaaataaacaagcgaag
aaaagtttatccaagggtagagttgtaatagtatcgtataaaaatcattttagaaaatta
ggtgtattgctgggagtcatttcatctaaagtctttggaaatcaatatcaagtattcgta
ttaaaagatggcaatcaacaagaagttaaaaatgatagacattcggacaattcagataat
gaaattaataaagaaaaatctgaaaattggtataatattatcgctttaaccaaaaagact
tattttataccatgtggagctccgtcgcatgaagtaatcattatttctccgtggaattta
atcgagataacaaatcatctccttaagatcgattgcaatatggtattgaaagattgggaa
aagagacaaatatttagatttaggaatgataaacctggacctacgtgtcaagcagttgtt
caagaattaatggcaatttctgtacattctaaaaaaaataatgatatattgtcaccatac
gtaaaatggaaagtacctgaaaatttaaatcctagatttatacacttacgcaaacaaatg
caagctctagaaaaaataaagtgtacagatataccaaacttcgaggaacaatttgaagtc
gtatttcatcgtatggaattatacagaaaacaaaaaaaacttcagcttaaactcagtgat
gaaggattatctttatatccagattatataaatatggttgcactacttaaacgtctggga
tatatagataacgatgaaagagttgctttaaaaggtagagtggcattacaaatgggagtt
aatgagttaatattaacggagcttattttaaaaaatgtattaacccctttgcaaccagct
aaaattgctgcgttattatctgctgtgatatatcaacaaaaggatgaagaattttcgctc
ccacctaattttaatcatttaaaaagagaatctgtagttttgtataatttgcatcaagat
ttacataaattggaacaagagtatcatttaaatacactgcaaccattgaatttttctttg
atggaagccgtttatgaatgggcacaagcaaaatcatttgctgaaataatgcaaaaagtt
gatgttcaggagggtattatagtcagagttattcaacaacttaatgaaacattgcaagat
atgaaaaatgcagctgtggcgattggtgatccagttttaaaaggtaaaatggaagaagca
tcaacagcaataaaacgtgatatagtttttgctgcatccttatacattcaagaataa
DBGET
integrated database retrieval system
