Polistes fuscatus (common paper wasp): 122519610
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Entry
122519610 CDS
T07683
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
pfuc
Polistes fuscatus (common paper wasp)
Pathway
pfuc03013
Nucleocytoplasmic transport
pfuc03015
mRNA surveillance pathway
pfuc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pfuc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122519610
09122 Translation
03013 Nucleocytoplasmic transport
122519610
03015 mRNA surveillance pathway
122519610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfuc03019
]
122519610
03041 Spliceosome [BR:
pfuc03041
]
122519610
Enzymes [BR:
pfuc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122519610
Messenger RNA biogenesis [BR:
pfuc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
122519610
Spliceosome [BR:
pfuc03041
]
Complex C
Other components
EJC/TREX
122519610
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
122519610
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
122519610
NCBI-ProteinID:
XP_043495122
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MADNDDLLDYEDEEQTEQVVDGSGDVPAKKEVKGTYVSIHSSGFRDFLLKPEILRAIVDC
GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLELTENQVYVLVMCHTR
ELAFQISKEYERFSKYMPYVKVAVFFGGLPIQKDEEVLKNTCPHIVVGTPGRILALVRNK
KLNLKHLKHFILDECDKMLELLDMRRDVQEIFRSTPHGKQVMMFSATLSKDIRPVCKKFM
QDPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCMAL
AQLLTEQNFPAIGIHRGMTQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYD
MPEDSDTYLHRVARAGRFGTKGLAITLVSDENDAKILNDVQERFDVNITELPDEIDLASY
IEGR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggctgataatgacgatcttttggattatgaagatgaggaacaaactgaacaagtagtt
gatggaagtggagatgttccagctaagaaagaagttaaaggcacatatgtgtctattcac
agtagtggtttcagagattttcttcttaaaccagaaatattaagagctattgttgattgt
ggatttgaacatccttctgaagtacaacatgaatgtattcctcaagctgtactcggtatg
gatattctatgtcaagcaaaatctggtatgggaaaaactgctgtatttgtattagccaca
ttacaacaattagaattaacggagaaccaagtctatgtcttggtaatgtgccacacaaga
gagcttgctttccaaattagcaaggaatatgagaggttcagcaaatatatgccttatgta
aaggtagcagtgttctttggtggattaccgattcaaaaagatgaagaagttttaaagaat
acttgcccacatattgtagtaggcactccaggacgtattcttgcccttgttcgaaataaa
aagttaaaccttaaacatttgaaacacttcatacttgatgaatgtgacaaaatgttggaa
ttgttagatatgcgcagagatgtacaggagatattcaggagcacaccacatggtaaacaa
gtcatgatgttcagcgctacgctatccaaagacatccgtcctgtctgcaagaaatttatg
caagatcccatggaagtctatgttgatgatgaagcgaagctaacattacatggcctccaa
caacattacgtgaaacttaaagaaaacgagaaaaacaagaagcttttcgaattattagat
gtacttgaattcaatcaggttgtaatattcgttaaatcggtgcaaagatgcatggctctg
gcacaactactcacagaacaaaattttcctgctattggaattcatagaggaatgacccaa
gaagaacgtttatcaagataccaacaattcaaagattttcaaaaacgaattttagtagct
actaatttatttggacgagggatggatattgaacgtgttaatatcgtatttaattatgac
atgcccgaagattctgatacgtaccttcacagagtagcgcgagcaggacgttttggtaca
aagggtcttgccatcacgttagtaagcgatgaaaatgatgccaaaatattaaatgatgta
caggaaagatttgacgtaaacattacagaattgccagatgaaatagatcttgcatcatat
attgaaggacgataa
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