Polistes fuscatus (common paper wasp): 122520788
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Entry
122520788 CDS
T07683
Name
(RefSeq) exosome complex exonuclease RRP44
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
pfuc
Polistes fuscatus (common paper wasp)
Pathway
pfuc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfuc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122520788
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfuc03019
]
122520788
Messenger RNA biogenesis [BR:
pfuc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
122520788
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
PIN_4
Rrp44_CSD1
CSD2
Rrp44_S1
OB_HELZ2
DUF3461
Dis3l2_C_term
Motif
Other DBs
NCBI-GeneID:
122520788
NCBI-ProteinID:
XP_043496983
LinkDB
All DBs
Position
Unknown
AA seq
981 aa
AA seq
DB search
MLTTKVYFRKTKGGNIYKTVREHYLRDDLWCGSKICKESSNDFPNRCKQKDRECILDIKD
TSAKSTFFSTPYYLVLDTNIILDQIDILSENVFYNVIILQTVLKEVRHKSPVVYKRLKEI
IADVKRRFYIFVNEHHKETYVERVPGENINDRNDRAIRVATKWYNKHLNPDGKKVLVVLL
TDDADNKMKAAQEDIPVFSMEEYVQSLEKSNFLLDKLSKRNFQLETEGREFFPCHLPPSE
LHYGIKNGKYFQGTFSASRENFLEGNVNVDGIEKSILVQGRMGLNRAIDGDIVAVELFPE
DQWSIPSDIVLQDEDDTDIPDILDDEKELNNSLNVKDTERTPTGKIVGIIRRKWRQYCGI
LKPSIIQGNVKHLFVPAERKIPKVRIETRQSELLSKQRIIVAIDSWPRNSRYPLGHFVRA
LGNIGDKETENEVLLLEHDVPHSRFSDAVLSFLPKMPWSIPEDVIAKREDLRHLDICSVD
PPGCTDIDDALHCRLLPNGNYEVGVHIADVTHFIKVGTALDKEAALRGTTVYLVDKRISM
IPELLSNNLCSLRENEDRLTFSCIWEIDSEANIINTTFCKSVIRSRRAMTYEEAQIKIDD
VNQNDVIAESLRNLNNFAKKLKKKRMDKGALTLASPEIYLREDNETHEPIDVQVKKLRDT
NFMIEEFMLLANISVAHKIFSEFPECAMLRRHPEPSQKNFEPLIKAGKNQGFVINTNSGK
ELAESLDKAQKEDNPYFNTMLRILATRCMLQAVYFISGMHQQNEFFHYGLASPIYTHFTS
PIRRYADIIVHRLLAVCIGADVTYPELLDKQENHKLCSNLNYRNRMAQYAGRASVALNIH
LFFREKVKDEEGYILFVRKNALQVLIPKYGLEGTLYLNKAESSVNFTYNREDHSQSYENI
TFRTFDPIVVQLSLDRSNVQHEKLIFKLVKPEIPGFSVPPIIQESVEQQSISNVEVNVAN
TAEKRKSANVLQKKHKKKKKN
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgttaacgacgaaagtatattttagaaagactaaaggcggaaatatttataagactgtt
agggaacattacttgcgggatgatctttggtgtggttccaaaatctgcaaagaaagttct
aacgattttccaaatcgttgcaaacaaaaagatcgagaatgcatactagatattaaagat
accagtgcaaaaagcacttttttttcaacaccgtactatcttgtattggatactaatatt
attttagatcaaattgatatattgtcagaaaatgttttttacaacgttattattttacaa
actgtgttgaaagaagtacgacacaaaagtccagtcgtttataaaagattaaaagaaatc
attgccgatgttaaaagaaggttttatatttttgtcaatgaacatcacaaagaaacttac
gtggaaagagtaccaggggaaaatataaatgatcgcaacgatagagctatacgcgttgca
acaaaatggtacaataaacatttaaatcctgacggaaaaaaagttctcgttgttttatta
acagacgatgcagacaataaaatgaaagctgcgcaagaagacattcctgtcttttctatg
gaagaatacgttcaatcgttggaaaagtcaaatttcttgctagacaaattatctaaaaga
aattttcaactggaaacagaaggacgggaattttttccatgtcatttgccaccttctgaa
ttacattatggtattaagaatggaaaatatttccaaggaacattttccgcatcgagagaa
aattttctcgaaggaaatgtaaatgtagatggaatagaaaaatcgatactggtgcaaggt
agaatggggcttaatagggccatcgatggtgacatcgttgcggttgaactttttccagaa
gatcaatggtcaattcccagcgatatcgtattacaagatgaagacgatacagatatacca
gacatattagatgatgaaaaagaattaaataattcgttgaacgtaaaagataccgaaaga
actccaacagggaaaatagtgggtatcattagaagaaaatggagacaatattgtggtatc
ttaaaaccaagtattattcaagggaatgtaaaacatctttttgtacctgctgagagaaaa
attcctaaagttagaatagaaactaggcaatcggaattattaagcaaacaaaggattata
gtagccatagattcatggccaagaaattcgagatacccattgggacattttgtacgagct
ttaggtaatattggagataaagaaactgaaaatgaagtattgcttttagagcacgatgtt
ccacacagccgattttccgatgcagtacttagctttcttccaaaaatgccatggtctatt
ccggaagacgttatcgcaaaaagagaagatttgaggcatttggacatttgttccgtagat
ccaccagggtgtactgacattgatgatgctttacactgtagattattaccaaatggtaac
tacgaagttggcgtgcacattgcagatgtaactcattttattaaggttggaacagctttg
gataaggaagctgccttaagaggtactacagtctatctagttgacaaaaggatttctatg
ataccagaactactaagtaataatttatgctctctaagagaaaatgaagatagattaaca
ttttcttgtatatgggaaatcgactctgaagcaaatatcataaataccacattttgtaaa
tcagtaataagatcacgtcgtgccatgacttatgaagaagctcaaattaaaatcgacgac
gtcaatcagaacgatgtaattgccgaatcattaagaaatttaaataattttgcaaaaaaa
ttgaagaaaaaacgaatggacaaaggggctttgactttggcatcaccagagatctatttg
cgagaagataacgaaactcacgaaccgattgacgtgcaagtcaaaaaattaagggataca
aactttatgatcgaagaattcatgttactcgcaaatatttcagttgcacacaaaattttt
tcggaatttccagaatgtgcgatgcttagaaggcatcctgaaccatcgcaaaaaaatttt
gaaccattgattaaagctggaaaaaatcagggttttgtaataaatacaaacagtggaaaa
gaattagctgaatcattagataaagcgcaaaaagaagataatccttattttaatactatg
ttgagaattttggcaacaagatgtatgttacaagcagtatatttcattagtggaatgcac
caacaaaatgaattctttcattatggattagcttctccaatatatacgcactttacatca
cctatccgtagatatgcggatattatcgtacatcgtctcttggcagtatgcattggagca
gatgttacttatccagaattattggataagcaagaaaatcataaattatgttctaattta
aactatcgaaataggatggcacagtacgctggccgagcatcggttgcattaaatatacat
ttgtttttccgagaaaaagtcaaagatgaagaaggatatattcttttcgtacgaaaaaat
gcactacaagtactaattccaaaatatggtttagaagggacactgtatttaaacaaagct
gaatcatctgttaattttacatataaccgagaggatcattctcagtcatacgaaaatata
acatttcgaacatttgatcctattgtagtgcagttaagtttagatagatctaacgtccaa
catgaaaaattgattttcaagcttgttaagccagagattccaggtttcagcgttcctcca
ataatacaggaatcagttgaacaacaatccatttctaacgtggaagtaaacgtagcaaat
acagcagaaaaaagaaaaagtgcaaatgttttacaaaagaaacataagaaaaaaaagaag
aactaa
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