Polistes fuscatus (common paper wasp): 122526246
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Entry
122526246 CDS
T07683
Name
(RefSeq) ATP-dependent RNA helicase Ddx1 isoform X1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
pfuc
Polistes fuscatus (common paper wasp)
Brite
KEGG Orthology (KO) [BR:
pfuc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pfuc03041
]
122526246
03016 Transfer RNA biogenesis [BR:
pfuc03016
]
122526246
Enzymes [BR:
pfuc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122526246
Spliceosome [BR:
pfuc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
122526246
Transfer RNA biogenesis [BR:
pfuc03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
122526246
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
122526246
NCBI-ProteinID:
XP_043505470
LinkDB
All DBs
Position
Unknown
AA seq
730 aa
AA seq
DB search
MAAFEEMGVLPEIAKAVEEIDWMLPTDVQAEAVPLILGGGDVLMAAETGSGKTGAFCLPI
LQIVWETLKDMESGKAGNTTKEVAHSTHWGLSLFDRGHALAVTPDSLRCQSREQKEWHGC
RANKGIQGDGKYFFEAIPTDEGLCRVGWSTSQASLDLGTDKFGYGFGGTGKKSNAKQFDN
YGEPFGMHCVIGCLLDLTNGKISFTKNGVNLGVAFTLNSQQKSQIFFPAVVLKNAEMSFN
FGAQPFKYPPPNDYVAVSSAPKDRVKLNPVNSSSSQRTGSNKPINNAPQAIIIEPSRELA
EQTFNQIQKFKTHLTNPFVRELLVIGGVSVKEQISTLNSGVDIVVGTPGRLEDLIQGGYM
SLTHCRFFVLDEADGLLKQGYTELIDRLHKQIPKITSDGKRLQMIVCSATLHSFEVKKMA
ERLMHFPTWVDLKGEDAVPETVHHVVVMVDPQKDKSWQNLRRHIETDGVHSKDNIKPGSN
TAEVLSEAVKILKGEYCIRAIREHKMDRALIFCRSKLDCDNLERYFKQVGVNELSCVCLH
GDRKPQERKANLERFKRKEVKFLICTDVAARGLDITGLPFMINVILPDEKSNYVHRIGRV
GRAERMGLAISLVSSVPEKVWYHGEWCHSRGRNCRNSNLTDQGGCCIWYNEPRYLAEIED
HLNVTIEQVGPDIKVPINEFDGKVSYGEKRAAMGTNYENHVQQMAPVVAELTRLESKAQF
IYLDRHLIVH
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgttcgaagaaatgggtgttctacctgaaatagcgaaagctgttgaagaaata
gattggatgctcccgacggatgtgcaggcagaagctgttcctttgattttgggtggaggt
gatgttttaatggctgcagaaactggaagtggaaaaactggagcattttgtttaccaatt
ttgcaaattgtatgggaaactttaaaagatatggaatctggaaaagctggcaatactacg
aaagaagtagcacactccacacattggggattaagtctatttgatagaggtcatgcttta
gccgttacaccggatagtttaagatgtcaaagtcgtgagcagaaggaatggcatggatgt
cgtgccaataaaggaatacaaggagatggaaaatatttttttgaagctataccaacggat
gagggtttatgccgtgtgggctggtctacgtctcaggcctctttagatttaggaacagat
aaattcggctatggttttggaggtactggtaaaaaatcaaatgcaaagcagtttgataat
tatggtgaaccttttggaatgcattgcgtgattggatgcttacttgatttaacaaatggc
aaaatatctttcacgaaaaatggtgtcaatctgggggtagcttttacattgaattctcaa
cagaaatcacaaatatttttcccagctgttgtattgaaaaatgcagaaatgtcatttaat
tttggtgctcaaccattcaagtatcccccaccaaatgattatgttgctgtatcttcggct
ccaaaagatcgcgtaaaacttaatcctgtcaacagtagtagcagtcaaagaacaggaagc
aacaagcctataaacaatgcaccacaggcaataattattgaaccttctcgggaattggcc
gaacaaactttcaatcagatacaaaaatttaaaacacatttaacaaatcctttcgttcga
gaactattagttattggaggagtaagcgtaaaggaacagatttcaactttaaattcagga
gttgatatagtagttggcacacctggacgtttggaagatctgatacaaggaggatacatg
tcattgacacattgcagattttttgtattggatgaagctgatggattattaaagcaggga
tatacagaacttatcgaccgtttacataaacagattcctaagattacatcagatggaaaa
agattgcagatgattgtatgttcagcaactttacattcgtttgaagttaaaaagatggct
gaacgtttaatgcattttccaacgtgggttgatttaaaaggagaagatgcagttcccgaa
actgttcaccatgtcgtagtaatggtagatcctcaaaaagacaaatcgtggcaaaattta
agaagacacattgaaacagacggagtgcatagtaaggataatataaaacctggaagtaac
acagccgaggtattgtcagaagctgttaaaatattaaaaggagaatactgtattcgtgct
attagggagcataaaatggatagagcattaattttctgcagatccaaactcgattgcgat
aatttggaacgttactttaagcaagtaggagtaaatgaactctcgtgtgtctgtttgcat
ggcgatagaaaaccgcaagagcgtaaagcaaatttagagagattcaaaagaaaagaagtt
aaattcttaatttgcacggatgtagcggcaagaggtcttgatataactggtttaccattt
atgatcaatgttattttgcccgatgagaaatcaaattacgtgcatagaattggtagagtt
ggtagagccgaacgaatgggtttggctatttccttagttagcagtgtaccagaaaaagta
tggtatcacggtgaatggtgtcattcccgtggtcgaaattgtcgtaatagtaatctcact
gatcaaggtggatgttgtatctggtataacgaacctagatatctggcagaaattgaagat
catttgaatgtaacgattgaacaagttggcccggatataaaagttcctataaatgaattc
gatgggaaagtcagttatggagaaaaaagagcagctatgggaaccaattacgaaaatcat
gtacaacaaatggcacccgtcgtcgctgagttgactagattggaatcaaaagcacaattc
atatatctagataggcatttaatagtacattaa
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