Polistes fuscatus (common paper wasp): 122526554
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Entry
122526554 CDS
T07683
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
pfuc
Polistes fuscatus (common paper wasp)
Pathway
pfuc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pfuc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122526554
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfuc03021
]
122526554
03019 Messenger RNA biogenesis [BR:
pfuc03019
]
122526554
Transcription machinery [BR:
pfuc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
122526554
Messenger RNA biogenesis [BR:
pfuc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
122526554
U7-dependent histone pre-mRNA processing factors
122526554
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
Atrophin-1
Motif
Other DBs
NCBI-GeneID:
122526554
NCBI-ProteinID:
XP_043505980
LinkDB
All DBs
Position
Unknown
AA seq
1112 aa
AA seq
DB search
MDPRIHRRSEQEKGPGDLVVEWLNEASTCLDVDVKVSNLCKVQEILCNKELQLLPLYLDE
TMQFSLDRAAEVRKTITGFIEEAGVKQPETIPRIVPVLLRLVSDKAPVVAKRALRASGRI
LRAALKWISYAAVVTLEMEMAWSQLCCLKVQIINMIDSDNDGIRTQAVKFLEGVVLIQTY
PDSDAPKKPDDFSLEDIPLTLKIVRRRKLEEEANHVMDLLIKFHGSPHVSSVNLMTCMGS
LALIAKTRPQFMSSVIQALQKLQHDLPPTLSDSQVTSVQKQLKLTLLGLMKHPSGIEFAS
TIAKLLAQLGAKEQEIIKAYPKPEDVRRIKKRQQEAAVAIAVKRAKVDTSLIPEETEVVA
NPVLVPKLPELIELSESFIAERLSVEIATELVMDSMAWVPDTMTTIFQREYQPTSTTDIN
VQCQTIARLLAAQIKQAKAKKSKKDAKDEDAVMEDLIKNPTISVAEAKRERKREKDREKE
KEAKASLEAHEKSLAKARNRLKSLKLSEVTKPLSKEGKETMLLMAVNRILLAEKVAVLGG
VSAVRSKILTTLAATFNPYIKEAVLHYITDDMRNRLDLALGWLYEEYALLQGFQRRTTLS
TKPQEAPHQAYNFLLCTLVSAIDLVQGKDRDTLLYRLYLEAPLITEDAVEALKMVSSDET
KGLAPLQLLKEMVIRRPTKQLVFLNVLLCHTGHENNAIREAAIQLVCQLYARPELSKLIE
EYAVLYLGFLRLQTPPEIVFGQDRGRPQTENQWTESTTRACLGLYLALLSEHQDLIHELA
RVYTSMGADVKRMVLRLVEGPVRSLGMGSPQLLALVENCPKGAETLVTRIIHILTEKSIP
SAELVAKVRELYQTRVSDVRFLIPVLNGLTKKEVIAALPKLIKLNPIVVKEVFNRLLGTH
NNDSGVLHTSPITPAELLIALHNIDPSKAELKTIIKATSLCFAENQVYTQETVAVVIQHL
MEMTPLPTLLMRTVIQSLALYPRLSGFVMNILQRLIVKQVWKQPKVWEGFVKCCERTKPQ
SFAVILQLPSTQLLEALKMAPNLRAPLLSHVEAFTENQKAHIPQSIMDIIQGKSSCEMHD
EFDIAPPGDFPGEQKPETTETDLSEPAPPGLD
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggatccacgaatacacagaagatcagagcaggaaaaagggccgggtgatttggttgtt
gaatggttaaatgaagcttctacgtgccttgatgtagatgtaaaagtttctaatttatgt
aaagtccaagaaattttatgtaataaggaacttcaattacttccattgtatttggatgaa
actatgcaattttctttagacagagctgctgaagtgagaaagacaattacagggtttatt
gaagaagcaggtgtaaaacaaccagaaacaataccacgaatagttccagtactattaaga
cttgtctcagataaagcaccggtagtagctaaaagagctcttcgagctagtggaagaatt
cttagagcagctttaaaatggatctcttatgctgctgttgtaacattagaaatggaaatg
gcatggtctcaactatgttgtctaaaagttcaaattattaatatgatagatagtgacaat
gatggtattagaacacaagcagttaaatttttagagggagttgttttgattcaaacctat
ccagattctgatgccccaaaaaaaccagatgatttctctcttgaagatattccattgaca
ttaaagatagttcgcagaaggaaattagaagaagaagcaaaccatgttatggatttactt
attaaatttcatggatccccacatgtcagtagtgtcaatttaatgacatgtatgggttct
ttggccttaattgctaaaactagaccacaatttatgtctagtgtaattcaagctttacag
aagttacaacatgatttacctccaaccttgtccgattctcaagtaacaagcgtacaaaag
caattgaaacttactctacttggattaatgaaacatccatctggtatagaatttgcttca
actattgctaagttattagctcagcttggtgccaaagaacaggaaattatcaaagcttat
cctaagccagaagatgtcaggcgcattaaaaaacgtcaacaagaagcagcagttgcaatt
gctgttaagcgtgcaaaagtagatacttctttaatacctgaagaaactgaagtggtagca
aatccagttttagtaccaaaattacccgagttaattgaactctctgaaagttttatagcg
gaaagattaagtgtagaaatagccacagaattagtaatggacagtatggcatgggttcca
gatactatgacgaccatttttcaaagagaatatcagccaacttcaacaactgatataaat
gtacaatgtcaaacaattgcaagacttttagctgcacaaattaaacaagctaaggcaaag
aaaagtaagaaagatgccaaagatgaagacgctgtgatggaagatttgataaaaaatcca
accattagtgtggctgaagcaaaacgagaacgaaaacgtgaaaaagatagagagaaagaa
aaagaggcgaaggcatcattagaggcacatgaaaaatcgttagccaaagcacggaatcgt
ttgaaatctttaaaattatcagaagttacaaaaccgcttagtaaagagggaaaagaaacg
atgttgttaatggcagttaacagaattctacttgcagagaaagttgcagttcttggtggt
gtttctgctgtaaggtcaaaaatcttaacaactttagcagcaacctttaatccatatatt
aaagaagcagtacttcattatattacggatgatatgagaaatcgcttagatttagcttta
ggttggttgtacgaggaatatgccttattgcaaggttttcaaagacgaacaaccttaagt
acgaagccacaagaagctccacaccaagcctacaatttcttgttatgtactttagtttct
gcaatagatttggttcaaggcaaggatcgtgatactttattgtatagattgtatttagaa
gcacctttaattacggaagatgcagtagaggctttgaagatggtttcatcagacgaaaca
aaaggtcttgcaccattgcaacttttaaaagaaatggttatcagaagacctactaaacaa
ttagtttttctgaatgtcctcttatgtcatacaggacatgaaaacaatgcgataagagaa
gcagcaatacagttggtttgtcaattatatgcccgacctgaattaagcaaacttatagaa
gaatatgcagttctttatttaggctttttacgtttgcaaactcctcctgaaatagttttt
ggtcaagatagaggaagacctcaaacagaaaatcaatggacagaatctactaccagagct
tgtttaggattatatctggctttattaagcgaacatcaagatcttattcatgaattagca
agagtgtacacatcaatgggagcagatgtaaaacgcatggttctcagattagttgaagga
cctgtaagatcattaggaatgggtagtccacaattacttgcacttgttgaaaattgtccg
aaaggagcagaaactttggtcaccagaattatacatattcttacagaaaaatctatacca
agcgcagaattagtagcaaaagtaagagaattatatcagacaagagtatcagatgtaaga
tttcttatacctgttttaaatggtttaaccaaaaaagaagttattgctgctcttcctaaa
ttaataaaattaaaccctattgtcgttaaagaggtatttaatagacttctaggcacacat
aacaatgatagtggtgtgctacatacatctccgattacgcctgcagaattattgatagct
ttgcacaatatcgatcctagcaaagcagaactgaagactataataaaagcaacctcctta
tgttttgcggaaaatcaagtttacacgcaagaaactgttgccgtcgtaatacaacattta
atggaaatgacacctttacctacgttattaatgcgtacggttatacaaagcttagccctt
tatcctagacttagtggttttgttatgaatatacttcagcgtttgatagttaaacaagta
tggaaacaacctaaagtttgggaaggtttcgttaaatgctgcgaacgtacaaagccacaa
agttttgcagttattttacagttaccatcaacacaattgcttgaagcattaaaaatggct
ccaaatttaagagcacctttgctatctcatgttgaagcatttactgaaaatcagaaagca
cacattccacaatccataatggatattatacaagggaaatcatcttgtgaaatgcatgat
gaattcgatattgcacctcctggtgattttccaggtgaacaaaaaccagaaacaacagaa
acagatttatcagaaccagctccccctggtctagactag
DBGET
integrated database retrieval system