Prevotella fusca: ADJ77_00425
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Entry
ADJ77_00425 CDS
T04032
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pfus
Prevotella fusca
Pathway
pfus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ADJ77_00425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfus03019
]
ADJ77_00425
03400 DNA repair and recombination proteins [BR:
pfus03400
]
ADJ77_00425
Enzymes [BR:
pfus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ADJ77_00425
Messenger RNA biogenesis [BR:
pfus03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ADJ77_00425
DNA repair and recombination proteins [BR:
pfus03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ADJ77_00425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
Helicase_C
RQC
HRDC
RecQ_Zn_bind
HTH_40
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
AKU69613
UniProt:
A0A0K1NL65
LinkDB
All DBs
Position
1:98258..100441
Genome browser
AA seq
727 aa
AA seq
DB search
MTQEVNLTEKLKHYFGFDKFKGDQEAIIRNLLDGQDTFVLMPTGGGKSLCYQLPSLIMEG
TAIVVSPLIALMKNQVDVINGISEEDGVAHYLNSSLKKAEIDQVRSDIVSGRTKLLYVAP
ESLNKEENMEFLKSVKISFYAIDEAHCISEWGHDFRPEYRKIRYAIETIGTAPVIALTAT
ATDKVRTDIVRSLGIEDCAEFKSSFNRPNLYYEVRPKKNDDDTNKQIIKFIKQHAGKSGI
IYCLSRKKVEELAAILQANDIKAAPYHAGLDSETRSKTQDDFLMEELDVIVATIAFGMGI
DKPDVRFVIHYDIPKSLEGYYQETGRAGRDGEEGICVVFYSKKDLNKLEKFMEGKPVAEQ
DIGRQLLQETEAYAESSVCRRKMLLHYFGEEYPKENCCMCDNCLHPKKKIEGQKQLLIVL
QAVKTLKENFRQEYVIDFVRGRATDDQKDHKHDELDEFGEGEDEDPKIWNPVIRQALLAG
YLKKDVENYGLLKLTSAGKRFMKSPESFMIVMDAEFKEEDEDDEPMMGSAVLDPELFSML
KNLRKKIARKLEIPPYVIFQDVSLEQMAMMYPVNEQELQNIQGVGAGKAKRYGKEFCELI
KQHCEENNIERPEELRVRTVAKKSMQKVKIIQSIDRQLPLDDIASAEGLDFDDLLTKIEE
IVYSGTKLNIDYFLEDVYDEDQIDDIYDYFMDSETDSLDAAMEELDGDYSEEEIRLVRIK
FLSEMAN
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgacacaagaagtcaatcttaccgaaaaactaaaacattactttggctttgacaagttc
aaaggcgaccaagaggctattatccgcaatcttcttgacggacaagatacctttgtgctg
atgccgacaggtggtggcaagagtctttgttatcagcttccttcattgattatggaagga
acggcgatagtcgtttctccgctcattgcattgatgaagaaccaggtggacgtcatcaat
ggaatcagcgaggaagatggtgtggcgcattatctcaactcttccttgaagaaagccgaa
atcgatcaggtgcgttcggacattgtttctggtcgcacaaaactgctttatgtggctccg
gagtccttgaacaaagaggagaatatggagttccttaagtcggtgaagattagcttctac
gctatagatgaggcacattgtatctctgagtggggacatgacttccgccctgagtaccgt
aagattcgttatgccatcgaaacgattggcactgcgcctgtcattgcacttaccgcaacg
gctactgacaaggtacgtactgacattgtgcgcagtctgggcattgaggattgtgcggag
ttcaagagttctttcaaccgtcctaacctttattatgaggtgcgtccgaagaagaatgat
gacgatacgaataagcagattatcaagtttatcaagcagcatgcgggcaagagcggcatc
atctattgtctttcacgcaagaaggtggaagagctggcagccattctgcaagccaacgac
atcaaggctgctccctatcatgccggacttgactcggagacacgctccaagacacaggac
gacttccttatggaagaactggatgtgattgtggcaacgatagctttcggtatgggtatc
gacaagcctgatgtgcgtttcgtcatacattatgacattccgaagagtcttgagggttat
taccaggaaactggacgtgccggacgtgatggagaggaagggatatgtgtcgtgttctat
tccaagaaagacctcaataaactggagaagttcatggagggaaagcctgttgctgaacag
gatatcgggcgtcagctgttacaggaaacggaagcctatgcggaatcatctgtctgtcgt
aggaagatgctgttgcattactttggtgaggagtatccgaaggagaactgctgtatgtgc
gacaactgtctgcatcccaagaaaaagattgaaggtcagaagcaacttctcattgtcctt
caggctgtcaagacgctgaaagagaacttccggcaggagtatgtcatcgactttgtgcgg
ggtagggctactgacgaccagaaagaccacaagcacgacgagttagatgaattcggtgag
ggtgaggacgaagatccgaagatatggaatcctgtgatacgtcaggcgttactggctggc
tatctgaagaaggatgtagagaactatggactgttgaagctgacttctgccggtaagcgg
ttcatgaagtcgcccgagtcgtttatgatagttatggatgccgaattcaaggaggaggat
gaggacgatgagccaatgatgggttcggcggtgcttgatccggaactcttctccatgctg
aagaaccttcgcaagaagattgcgcgtaagttggaaatccccccttatgttatcttccag
gatgtttccttggagcagatggcaatgatgtatcctgtcaacgaacaggaactgcagaat
atccagggcgtcggtgccggtaaggcgaaacgttatggaaaggagttctgtgaactgata
aagcagcattgtgaggagaataacatcgaacgtccggaggaactgcgtgtcaggacagta
gcaaagaagtcgatgcagaaggtcaagattatacagagtatcgaccgtcagttgccgctt
gatgacatcgcatcagctgaaggacttgatttcgatgacctgctgacaaagatagaggag
attgtctatagtggaacgaaactcaacatcgactacttccttgaggatgtgtatgatgaa
gaccagatagacgatatctacgattatttcatggatagcgaaactgacagtcttgatgct
gcgatggaagaacttgatggcgattacagcgaagaagaaatccgccttgtccgcatcaag
ttcctgtcagagatggccaactga
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