Prevotella fusca: ADJ77_06535
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Entry
ADJ77_06535 CDS
T04032
Name
(GenBank) ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
pfus
Prevotella fusca
Pathway
pfus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ADJ77_06535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfus03019
]
ADJ77_06535
03016 Transfer RNA biogenesis [BR:
pfus03016
]
ADJ77_06535
Enzymes [BR:
pfus01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
ADJ77_06535
Messenger RNA biogenesis [BR:
pfus03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ADJ77_06535
Transfer RNA biogenesis [BR:
pfus03016
]
Prokaryotic type
tRNA degradation factors
ADJ77_06535
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
S1
OB_RNB
OB_Dis3
RNase_II_C_S1
TEBP_OB2-like
OB_RNR_1st
Motif
Other DBs
NCBI-ProteinID:
AKU69442
UniProt:
A0A0K1NK11
LinkDB
All DBs
Position
1:1593715..1596012
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AA seq
765 aa
AA seq
DB search
MRKEKKGSKRLTKKQLAERLTSFFQTQPDETFSFKQIFHALKLTTHPAKMLAIDVMEEMA
WDDFLSKVGDSAYTLNTKGQVQEGTFIRKANGKNTFLPDDGGTPVFVSERNSMAALNGDQ
VRVQFMARRQNHIKEAMVIAILQRKKDTFVGRLRVEKDIAFLVTQENLFIHDILIPKKKL
KGGATDDRALVKITKWPDADHKNLVGEVVDVLGEAGDNDVEMNTILAQYGLPYRYPKRVE
DAAEKINAEITAQDYAEREDFRDVWTCTIDPKDAKDFDDALSIRKLKDGLWEVGVHIADV
SHYVKEGDIIDREAEQRATSVYLVDRTVPMLPERLCNFICSLRPDEEKLAFSCIFNLDDE
ANVKTYRIVHTVIKSNRRYAYEEAQQILEANGVVDGTGEPAPDPGKAGYQGENAEEVVTL
DRLAKLIRACRIKGGSVKFDSEELHFDIDEKGKPTRCYFKRSKDANKLIEEFMLLANRTV
AESIGIAKKGKKAKTLPYRVHDNPDPQKFENLREFTAKFGYKLKSSSTKGATARALNKLM
DEVQGKREEKVIQAIALRSMMKAKYTTHNIGHFGLAFDYYTHFTSPIRRYPDMMVHRLIT
RYQNGGRSANKEHYEELCEHCSDMELVAQNAERDSIKYKMVEFMGDHIGECYDAHISGIQ
SFGIYAEIDENHCEGMIPMRDLDDDYYDFDEKNYCLVGRRRHHVYQLGDPIRIQVAKADL
ERRQLDFALDDGRPLKAKQAAAEYVVNRKNDRKSSKRGGRSHRRK
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaagaaaagaaaggcagcaaacgattgaccaagaaacagcttgcagagagactc
accagtttcttccagacacaacctgacgagacattcagcttcaaacagatattccatgca
ctcaaacttaccacgcatccagccaaaatgctggcgatagatgtgatggaggagatggcg
tgggacgacttcctgtcaaaggttggagacagtgcttacacgctgaataccaagggacag
gtacaggagggtactttcatacgcaaggcgaatggtaaaaatacgtttctgccagacgat
ggtggtacgccagtcttcgtctctgagcgcaattctatggcagctttgaacggcgaccag
gtaagggttcagttcatggctcgccgtcagaatcatataaaagaggcaatggtcatcgcg
atactgcaacggaagaaagacaccttcgtaggaaggttgcgggtcgagaaggacattgcc
ttccttgtaacacaggagaatctctttattcatgatatccttatccccaagaagaagctc
aagggtggagcgacagatgaccgtgctttggtgaagattaccaagtggccggatgctgac
cataagaatcttgtgggcgaagtggtggacgtcttgggtgaagctggtgataatgacgtg
gagatgaataccattcttgcacagtatggattgccttacaggtatccgaaacgtgtggag
gatgcagccgagaagattaatgctgagattacagcgcaggactatgcggagcgtgaagac
ttccgtgacgtatggacttgtacgatagatccgaaggatgcaaaggactttgacgatgcg
ctctctatccgaaagctgaaagacggactatgggaagtgggcgttcatattgcggatgta
tcgcattatgtcaaggagggcgatattattgaccgtgaggcagagcagagggctacgtcg
gtttatctcgttgaccgcactgttccgatgcttcccgagcgtctttgcaactttatctgc
tcactccgtccagatgaggaaaagctcgctttcagttgtatcttcaatcttgacgatgaa
gcaaatgtaaagacctaccgcattgtgcacacggttatcaagtcgaaccggcgttatgcc
tacgaagaggcacagcagatattggaagccaatggcgttgttgacggtacaggcgagcct
gctccagaccctggaaaggctggatatcagggagagaatgctgaagaagtggtcacactc
gaccgtcttgcaaagctgattcgtgcatgtcgaataaagggaggaagtgtcaagttcgat
tctgaagagctccacttcgacattgacgagaaaggtaagcccacccgttgttactttaaa
cggtcaaaggatgccaacaaactcatcgaagagtttatgcttctggctaacagaacagta
gctgaaagcatcggtatagcaaagaaaggcaagaaagccaagacccttccttaccgtgtt
cacgataatcctgacccgcagaagttcgagaacctgcgtgagttcacggctaagttcggc
tataagctaaagtcgtccagcaccaagggtgccactgcccgtgcgctgaacaagctcatg
gacgaggtgcagggcaagcgtgaggagaaggtgatacaggctattgcactccgttcgatg
atgaaggcgaaatataccacacacaacatcggtcacttcggacttgccttcgactattat
acacacttcacctcgcccatccgtcgttaccccgacatgatggttcaccgcctgataacc
cgttatcagaacggcggtcgctctgccaataaggaacattacgaggagctttgtgagcac
tgttcagacatggaactcgttgcacagaatgctgaacgcgactccatcaagtataagatg
gttgagtttatgggcgatcatatcggtgaatgttacgatgcacatatctccggcatccag
agtttcggcatctatgcagagatagatgagaaccactgtgagggtatgataccaatgcgc
gacctcgatgatgactattacgacttcgatgagaagaactattgtcttgtcggtcgtcgt
cgtcaccatgtctatcagcttggtgatcctatccgtattcaggtagcgaaggctgacttg
gagcgtcggcagctcgactttgcacttgatgacggacgtccgttgaaggcaaaacaggct
gcagcagagtatgttgttaacaggaagaacgacaggaagagcagcaaacgtggcggcaga
agccacagaagaaagtag
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