Pseudomonas fuscovaginae: NLK61_00470
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Entry
NLK61_00470 CDS
T10659
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pfuv Pseudomonas fuscovaginae
Brite
KEGG Orthology (KO) [BR:
pfuv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfuv03032
]
NLK61_00470
03400 DNA repair and recombination proteins [BR:
pfuv03400
]
NLK61_00470
Enzymes [BR:
pfuv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NLK61_00470
DNA replication proteins [BR:
pfuv03032
]
Prokaryotic type
DNA Topoisomerases
NLK61_00470
DNA repair and recombination proteins [BR:
pfuv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NLK61_00470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
UUQ65160
LinkDB
All DBs
Position
92170..93237
Genome browser
AA seq
355 aa
AA seq
DB search
MPDASAPVELPAELHYVDDTQPGIRRRKSRNRFAYFTATGERIRDPQEIQRINALAVPPA
YTDVWICADPQGHLQATGRDARGRKQYRYHPRWREIRDQDKYARLLAFGKALPKLRQQLQ
LILARPGFNRDKVMATVISLLDATLIRIGNSRYARENRSYGLTTLRNRHVEINGSAMIFQ
FRGKSGVEHRVTVKDRRLATVLKRCLELPGQHLFQYLDENGERHVVTSSDVNACLHELTG
ADFTAKDFRTWAGSAMALAMLRELQWEPETEAKKQIVEMVKSVSRQLGNTPAVCRKCYIH
PGVLEAFVLGELAELPKPRMRKGLHREEVSLAMFLQARHEAAVAQTKHPSQRSHR
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatgcttcagcgcccgtcgaactgcctgccgagctgcattacgtcgacgacacc
cagcctggcatccgccgcaggaaatcgcgcaaccgcttcgcctacttcaccgcaaccggc
gaacgcattcgcgacccgcaggaaatccagcgcatcaatgcgttggccgtgccgccggcc
tacaccgatgtgtggatctgcgccgacccgcaaggccatctgcaggcaaccggtcgcgat
gcccggggccgcaagcaataccgttatcacccgcgctggcgggagatccgcgaccaggac
aaatacgcgcggctgctggccttcggcaaggcgctcccgaagctgcggcaacaattacag
ctcatcctcgcaagacccggcttcaaccgcgacaaggtcatggccaccgtgatcagcctg
ctcgacgccactctgatccgcatcggcaacagccgctatgcccgggaaaaccgttcctac
gggctgacgaccttgcgtaaccgtcatgtcgagatcaacggcagcgcaatgatcttccag
tttcgcggcaagagcggtgtcgagcaccgagtcacagtcaaggaccggcgcctggccacg
gtgctcaaacgctgcctggaactccccggccaacacctgtttcaatatctggacgaaaac
ggcgagcgacatgtcgtcacttcctcggacgtcaacgcctgcctgcatgagctgaccggc
gccgacttcaccgccaaggatttccgtacgtgggccggcagcgccatggccctggccatg
ttgcgcgaactacagtgggaaccggaaaccgaggcgaagaaacagatcgtcgaaatggtc
aagagtgtttccaggcagttgggcaataccccggccgtctgccgcaagtgctatatccat
ccaggtgtccttgaagccttcgtccttggcgagttggccgaactgcccaagccgcggatg
cgcaagggattgcatcgggaggaagtcagcctggcgatgttcctgcaggccagacatgag
gctgctgtggcgcagacaaaacacccttcgcaacggagtcaccgatga
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