Pseudomonas fuscovaginae: NLK61_08840
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Entry
NLK61_08840 CDS
T10659
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
pfuv Pseudomonas fuscovaginae
Pathway
pfuv03410
Base excision repair
Brite
Enzymes [BR:
pfuv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
NLK61_08840
Transcription factors [BR:
pfuv03000
]
Prokaryotic type
Helix-turn-helix
AraC family
NLK61_08840
DNA repair and recombination proteins [BR:
pfuv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NLK61_08840
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
UUQ66732
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Position
complement(1959928..1961424)
Genome browser
AA seq
498 aa
AA seq
DB search
MNRTITAPFPTADICEKARLSRDARFDGVFFTAVLSTRIYCRPVCPARPPKVENVQYYPS
AAAAEALGFRPCLRCRPELAPGNRVWLHGEHRVARALKLIHEGFLAEHSLDELAARLDVG
GRQLRRLFVQHLGASPIAVHATQRLLFAKQLLTETALPITEVALASGFQSLRRFNSAFAE
ANHVAPRELRRKPKMPAGNALVLRLGYRPPYDFTALLAFLAGRALPGIEVVEADSYRRVF
GSIESPSWLHVSPWPGEAHALKLELFNVPPAQMLPVVTRIRRMFDLDADPQAIVATLGAS
PVLAPLVERYPGQRLPGGWDGFEVAVRAVLGQQVSVAAARTLAARLLSRLGSVIEAPPAP
GLDRLFPTPEQLLEADLGAIGVIRARTATIQGIARALLDGRVNFRTEQRLEDFVRNWVSL
PGIGEWTAHYIAMRVLNHPDAFPAADLILRREVVTQGPPLSTRALEALAEDWRPWRAYSV
MYLWRQAVASELIRRSRK
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggacaatcactgcaccctttcccaccgccgatatctgcgagaaggctcgtttg
agccgcgatgcgcggttcgatggggtgttcttcaccgctgtgctcagtacccggatctat
tgccggccggtctgtccggcgcggccgcccaaggtcgagaacgtgcagtactaccccagc
gccgcggctgccgaggccctgggcttcaggccttgcctgcgctgccgcccggagctggcg
ccgggtaatcgtgtctggctgcacggcgaacatcgggtcgcccgggcgctgaagctgatc
catgagggttttcttgccgagcactcgctggacgaactggccgcgcgactggacgtcggt
gggcggcagttgcgccggctgtttgtccagcacctgggtgcctcacccattgcggtgcat
gcgacccagcgcctgctgttcgccaagcaactgctgaccgaaaccgccctgccgatcacc
gaggtggccttggcttcgggctttcagagtctgcgtcggttcaattcggcctttgccgag
gccaatcatgtcgcgccccgggagttgcgacgaaagcccaagatgcctgccggcaatgct
ctggtgctgcgtctgggctatcggccgccctacgatttcacggcgctgctcgcctttctc
gccggtcgcgccttgcccggtatcgaggtggtcgaggcggacagctatcgccgggtattc
ggcagcatcgagtcgcccagttggctgcacgtcagcccctggcccggcgaagcacatgcg
ctgaaactggagctgttcaatgtgccaccggcacagatgctgccggtggttacgcggatt
cggcggatgttcgatctggatgctgatccgcaggcgattgtcgccaccctgggcgcgagc
cccgtgctggcgccgttggtcgagcgttatcccgggcagcgcttgcccggcggctgggac
ggtttcgaggttgcggtgcgggcggtgttggggcagcaggtcagcgttgccgcggcacgc
accttggccgcgcgcctgttgagtcgtttgggtagcgtcattgaagcaccacccgcgccc
ggactggaccgactgttcccgacaccggagcaactgcttgaggccgacctgggcgccatc
ggcgttatccgggcccgcaccgcgacgatccagggcatcgcccgcgctctgctcgatggg
cgggtgaattttcgcaccgagcagcgtctggaggatttcgtccgcaactgggtctctttg
ccgggtatcggcgagtggaccgcccattacattgccatgcgggtgctcaatcacccggat
gcgttccccgctgcagacctgatcctgcgtcgggaagtggtcacgcaagggccaccattg
agtacccgggccctggaagccctggccgaagactggcgcccatggcgggcgtactcggtc
atgtacctgtggcgccaggccgtggcgtcggaattgatacgcaggagccgcaaatga
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