Pseudomonas fuscovaginae: NLK61_09040
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Entry
NLK61_09040 CDS
T10659
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
pfuv Pseudomonas fuscovaginae
Pathway
pfuv02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pfuv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NLK61_09040
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pfuv02022
]
NLK61_09040
02035 Bacterial motility proteins [BR:
pfuv02035
]
NLK61_09040
Two-component system [BR:
pfuv02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
NLK61_09040
Bacterial motility proteins [BR:
pfuv02035
]
Pilus system
Twitching motility proteins
NLK61_09040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
HTH_50
HTH_30
AAA_16
Mg_chelatase
Pre_tape_measure
AAA
AAA_22
VpsR
Motif
Other DBs
NCBI-ProteinID:
UUQ66766
LinkDB
All DBs
Position
1997719..1999062
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AA seq
447 aa
AA seq
DB search
MSPRQKILIVDDEPDIRELLEITLGRMKLETQSARNVGEAREKLARDSFDLCLTDMRLPD
GTGLELVQHIQQRHPQVPVAMITAYGSLDTAINALKSGAFDFLTKPVDLPRLRELVTSAL
RLPMAGQKPTTIDTRLLGDSLPMRALRKQIDKLARSQAPVYISGESGSGKELVARLIHEQ
GPRAERPFVPVNCGAIPSELMESEFFGHRKGSFSGAVEDKPGLFQAANGGTLFLDEVADL
PLAMQVKLLRAIQEKAVRSIGGQQEEVVDVRILCATHKDLNAEVSAERFRQDLYYRLNVI
ELRVPPLRERRDDIEPLAGNVLKRLASGSGLPAARLHPQALDTLKNYRFPGNVRELENML
ERAYTLCENDQIEACDLRLAEASGNTAEAGEPSLAQIDNLEDYLESVERKLILQALEETR
WNRTAAAQRLSLSFRSMRYRLKKLGLD
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgagcccacggcaaaagatcctgatcgtcgatgatgagccggatatccgcgaactcctg
gaaatcaccctgggccggatgaaactcgagacccagagcgcccgcaatgtcggcgaagca
cgagagaaactggcccgcgacagcttcgacctgtgcctgacggatatgcgcctgccggat
ggcaccggcctggaactggtgcaacacatccagcagcgtcatccccaggtgccggtggca
atgatcactgcctacggcagcctcgataccgccatcaatgcgctcaagtccggcgccttc
gactttctcaccaaaccggtggacttgccccgcctgcgcgaactggtcaccagcgccttg
cggctgcccatggccgggcagaaaccgaccaccatcgatactcggttgctcggcgactcg
ctaccgatgcgagccttgcgcaaacagatcgataagctggctcgcagccaggcaccggtc
tatatcagtggcgaatcgggcagtggcaaggaactggtggcccgcctgatccacgagcag
ggtccccgcgccgaacggccgttcgtgccggtcaactgcggagcgattccgtcggaactg
atggaaagcgaatttttcggccaccgcaaaggcagcttcagcggtgccgtcgaggacaag
cccggactgttccaggcggccaacggtggcacgctgttcctcgacgaagtggccgacctg
ccactggcaatgcaggtcaaactgctgcgggcgatccaggaaaaggccgtacgcagcatt
ggcgggcagcaggaagaagtggtggatgtgcgcatcctctgtgccacccacaaggacctg
aacgccgaagtcagcgccgaacggtttcgccaggatctctattaccggctgaatgtcatc
gagctgcgcgtcccgcccttgcgcgagcgccgcgacgatatcgagccactggcgggcaat
gtgctcaaacgcctggcctcgggcagtggattgcctgccgccaggctgcacccacaggca
ctggatacgctcaagaactatcgttttcccggcaatgtgcgagagctggagaacatgctt
gagcgggcctataccttgtgcgaaaacgaccagatcgaagcctgcgacctgcgcttggcc
gaagcctcgggcaatacagccgaggccggtgagccgagcctggcgcagatcgacaacctt
gaggactacctggagagcgtcgaacgcaagctgatcctccaggctctggaggaaacccgc
tggaaccgcacggcagcggcgcagcggttgagcctgtcgtttcgctcgatgcgttatcgc
ctgaagaaactggggctggactga
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