Pseudomonas fuscovaginae: NLK61_09955
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Entry
NLK61_09955 CDS
T10659
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pfuv Pseudomonas fuscovaginae
Pathway
pfuv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfuv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NLK61_09955 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfuv03400
]
NLK61_09955 (recC)
Enzymes [BR:
pfuv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NLK61_09955 (recC)
DNA repair and recombination proteins [BR:
pfuv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NLK61_09955 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
UUQ66939
LinkDB
All DBs
Position
complement(2199994..2203452)
Genome browser
AA seq
1152 aa
AA seq
DB search
MPDATSLNPAFMVVQSNSPEELRSLVINVMRRYPLAPLENEIALVQSNGIAQWLKLALAE
DAEDDDSGGCGIAAAIDVQLPGTFMWQLYRMVLGRDEIPPKSLLDKAPLTWRLMRLLPEL
IGQPHFEPLQRFLTHDSDLRKRYQLAERLADLFDQYQVYRADWLEDWAAGRHQLRSVRGE
IKPLSPANCWQAELWRALLLDVGTEGMAQSRAGVHQRFIERINTLETAPPGLPPRVIVFG
ISSLPAQALEALAGLARFSQVLLCVHNPCRHHWTDIVADKDLLRNEYKRQSRKAGMPLIL
DPEALHQHAHPLLAAWGKQGRDYINLLDSYDDPNSYRAAFRDGRIDLFSDSTPATLLNQL
QDDILELRPLTETRERWPAVDLQQDHSVRFEIAHSAQREVEILHDQLLARFSANPDLRPR
DVIVMVPDIDSYAPHIRAVFGQLERNDSRFIPFTLADQGQRGRDPLLIAVEHLLKLPDSR
FPVSEILDLLDVPALRARFNIQERDLPTLHRWIEGAGIRWGLSAEQRADLGLPEALEQNS
WRFGLRRMLLGYAVGTGEGCEGIEPYDEIGGLDAALIGPVVALLDALEIAHQELCEPARP
QQWGERLQALLQLFFLASTEHDDYLLIQLEQLRATWLETCEAVDLQEELPLTVVREAWLA
GLDQGRLSQRFLAGAVNFCTLMPMRAIPFKLVCLLGMNDGDYPRAQPPLDFDLMGSDYRP
GDRSRREDDRYLLLEALLSARELLYISWVGRSIRDNSERPASVLIGQLRDHIASGWRLPD
ADGEHLLEALTQEHPLQPFSARYFHAGDAGLFSYAREWQTLHEQQDASEPGSELAPYTQD
EPLTLAQLQDFLRNPVRHFFSQRLKVFFESAEAPLADEEPFVLDALQRYSLSDSLLNAAL
QQADNPEQALSNQARRLQGSGLLPMAGFGELLQQELIEPLPGLLERYQQLLMLWPTPVPS
ALPVSVDSQGVRLEGWLAGLHQRSDGGYLAVTTIPNSIGSLKTRKWHRLIKPWVNHLVAC
ACELPLTTALVASDDTLLLTPLEPERAKTLLGELLLAWQIGMRRPLPVAVKTAFAWLSQP
DPLKGEAAARKTYDGDGINSEGERRESAALARQFTDYNALVASEEFEGWCDSLYRPLLQA
PWRSLTAEEPRP
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgccggacgcgacgtcactcaaccctgcgttcatggttgttcagagcaacagccctgag
gaactgcgcagcctggtgatcaacgtgatgcggcgttatcccctggcgcccctggagaat
gaaatcgccctggtgcagagcaacggcatcgcccaatggctgaaactggccctggccgaa
gacgccgaggacgacgattccggtggctgcggcatcgccgccgccattgatgtgcaactg
cccggcaccttcatgtggcagctctatcgtatggtgctgggtcgcgacgagattccaccc
aagtcgctgctcgataaggcccccctgacctggcgtctgatgcgtttattgccggaactg
atcggccagccacacttcgagcccctgcaacgcttcctgacccacgacagcgacctgcgc
aaacgctatcaactggccgagcgcctggccgacctgttcgaccaatatcaggtctaccga
gcggattggctggaagactgggccgccggccgccatcagttgcgtagcgtacgcggcgag
atcaagccgctgagcccggcaaattgctggcaggcggagctgtggcgtgcattgctgctg
gatgtcggcaccgaaggcatggctcagagccgagcaggggtccaccaacgcttcatcgag
cgcatcaacacccttgagacggcaccaccaggcctgccaccccgggtgatcgtcttcggt
atttcctcgttgccggcccaggccctcgaagccctggccggtctggcacgtttcagccag
gtgctgctctgcgtgcacaacccctgtcgtcaccactggaccgacatcgtcgccgacaag
gacctcctgcgtaacgaatacaaacgtcagtcacgcaaggccggcatgccgctgattctc
gaccccgaagccctgcaccagcacgctcacccattactggccgcctggggcaagcagggt
cgtgactacatcaacctgctcgacagctacgacgacccgaacagctaccgtgcggccttt
cgtgatggccgcatcgacttgttcagcgacagcaccccagcgaccctgctcaaccagttg
caggacgatatcctcgaactgcgtccgttgaccgaaacccgcgaacgttggcccgccgtc
gacctgcagcaggaccactcggtccgcttcgagatcgcccacagcgcccagcgcgaagtg
gaaatccttcacgatcagttgctcgcccgtttcagcgccaacccggacctgcgcccgcgg
gacgtgatcgtcatggtcccggatatcgacagctacgccccgcatatccgcgcggtcttc
gggcagctcgaacgcaatgactcacgcttcattccgttcaccctggcagaccagggccaa
cgcgggcgcgacccgctgctgatcgccgtcgaacacttgctgaagttgcccgacagccgt
ttcccggtcagcgaaatcctcgatctgctcgacgtgccggctctgcgcgcccgcttcaat
atccaggagcgcgacctgccgaccttgcaccgctggatcgaaggcgcgggcatccgttgg
ggcctcagcgccgagcaacgtgccgacctcggcctgcccgaagcgctggagcagaacagt
tggcgtttcggcttgcgccgcatgttgctgggctatgcggtcggcaccggcgaaggttgc
gaaggcattgagccctatgacgaaatcggcggcctcgatgccgcgctgatcggtccggtg
gtggccttgctcgatgccctggaaatcgcccaccaggaactctgcgaaccggctcgcccg
cagcagtggggcgagcgcctgcaagcgctgctgcaactgttcttcctggccagcaccgaa
cacgacgattatctgctgatccagctcgaacaactgcgcgcgacctggctggaaacctgc
gaagccgtcgacctgcaggaagaactgcctctgacggtggtccgtgaagcctggctggct
ggcctcgatcaaggtcggctgtcccagcgcttcctcgccggtgcggtgaacttctgcacg
ctcatgccgatgcgggcgatcccgttcaaactggtctgcctgctcggcatgaacgacggc
gactacccgcgcgcccagccgccgttggacttcgatctgatgggcagcgactaccgcccc
ggtgaccgttcgcgccgtgaagacgatcgctacctgttgctcgaagcgctgctttcggcc
cgtgagctgttgtatatcagttgggtgggccgcagcatccgcgacaacagcgagcgtccg
gcctcggtactgatcggccaactgcgcgaccatattgccagcggttggcgactgccggat
gccgatggcgagcacctgctcgaagccctgacccaggagcacccgctgcaacccttcagc
gcccgctatttccatgcaggcgatgccggtctgttcagctacgcccgtgaatggcagaca
ttgcacgaacagcaggatgccagcgaacctggaagcgaactcgcaccctacactcaggac
gagccgctgaccttggcgcagttgcaggatttcctgcgcaaccccgtccggcatttcttc
agccagcgtctgaaagtcttcttcgagtctgccgaagcaccgttggccgatgaagagccg
tttgtcctcgatgccctgcaacgctacagtctcagtgacagcctgctcaatgccgccttg
cagcaggcggacaaccccgagcaggcgctgagcaaccaggctcgccgtctgcaaggcagc
ggcctgctgcccatggccggcttcggcgaactgctgcaacaggaactgatcgagccactg
cccggcctgctggaacgctaccaacaactgctgatgttatggccgacgccggttcccagt
gccctgccggtcagtgtcgacagccagggcgtacgcctcgaaggctggctggccggcttg
catcagcgcagcgatggcggttacctcgccgtcaccaccatccccaacagcatcggttcg
ctcaagacccgcaaatggcatcgcctgatcaagccctgggtcaatcatctggtggcctgt
gcctgcgagctgccgctgaccaccgctctggtcgccagcgacgatactttgctgctgaca
ccactcgagccggagcgggccaagaccctgctcggcgaattgctgctggcctggcagatc
ggcatgcgccgaccgctgccggtggcggtcaagaccgccttcgcctggttatcccagccg
gacccgctcaagggcgaggccgccgcacgcaagacctacgacggcgacggcatcaacagc
gaaggcgaacgccgcgaaagcgccgccctcgcccggcagttcaccgactacaacgcgctg
gtcgccagcgaagagttcgagggctggtgcgacagcctctatcgacccttgctccaagcc
ccctggcgttcactgaccgccgaggaaccgcgtccatga
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