KEGG   Pseudomonas fuscovaginae: NLK61_12880
Entry
NLK61_12880       CDS       T10659                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
pfuv  Pseudomonas fuscovaginae
Pathway
pfuv03030  DNA replication
pfuv03410  Base excision repair
pfuv03420  Nucleotide excision repair
pfuv03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pfuv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NLK61_12880 (polA)
   03410 Base excision repair
    NLK61_12880 (polA)
   03420 Nucleotide excision repair
    NLK61_12880 (polA)
   03440 Homologous recombination
    NLK61_12880 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pfuv03032]
    NLK61_12880 (polA)
   03400 DNA repair and recombination proteins [BR:pfuv03400]
    NLK61_12880 (polA)
Enzymes [BR:pfuv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     NLK61_12880 (polA)
DNA replication proteins [BR:pfuv03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     NLK61_12880 (polA)
DNA repair and recombination proteins [BR:pfuv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     NLK61_12880 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NLK61_12880 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1
Other DBs
NCBI-ProteinID: UUQ67477
LinkDB
Position
complement(2866479..2869286)
AA seq 935 aa
MSKAPLVLVDGSSYLYRAFHAMPPLTNSKGVPTGAVKGVLNMLRSLRKQYPDSPFAVVFD
AKGGTFRDEMFADYKANRPSMPDEMRVQIEPLHASVRAMGFPLLCVEGVEADDVIGTLAR
SSAAADRPVVISTGDKDMAQLVDGHITLVNTMSETSMDVEGVKAKFGVAPEQIIDLLALM
GDSSDNIPGVKGVGEKTAVALLVGVNGGLKELYANLDLVPTLPIRGAKTLPAKLLEHQEM
AFLSYRLATIKVDVELEVGLDDLHLGEPDRDKLIELYTSLEFKGWLDELNRDAKRASLQE
TAAPAATPAVVEDAAAETAVPAPAEPQYETILDPARLDVWLKKLQDAKLFAFDTETTGID
AQQAQLVGVSFSVQANEAAYIPLTHSYIGVPQQLDRDSVLLALKPLLEDPQKLKVGQHAK
FDMNILANCAIGGDPEQGISVRGIAFDTMLESYVLNSTATRHDMDSLAKKYLDYDTVSFQ
DIAGKGAKQLTFDQIPLEQAGHYAAEDADVTLRLHQALHEQLAAIPSLASVLSDIEIPLV
PVLARIERQGALVDKDLLGVQSIELGNKMVELEREAFKIAGEEFNLGSPKQLGVILYEKL
GLPVLKKTGKGQPSTAEEVLAKLAEDDYPLPKVLMQYRSMSKLKSTYTDRLPEQINPRTG
RIHTSYHQAVAATGRLSSSDPNLQNIPVRTAEGRRIRQAFVAPKGYKLLAADYSQIELRI
MAHLSKDEGLLNAFRDNLDVHTATAAEVFKVELNEVTSDQRRSAKAINFGLIYGMGAQKL
GKDIGVDTKTAKAYIDVYFARYPGVREYMERTRGQASEQGYVETLFGRRLYLPDIHSNKP
QERAAAERTAINAPMQGTAADIIKKAMVKVDDWLTSSGLDAKVILQVHDELVLEVREDLV
AEVSEQIRVHMSGAAQLDVPLLVEVGVGNNWDEAH
NT seq 2808 nt   +upstreamnt  +downstreamnt
atgagcaaagctcccctcgtcctggtggacggttcttcgtacctgtaccgcgcgtttcac
gcgatgccgccgcttaccaattccaagggggtgccgaccggtgcagtgaagggcgtcctg
aacatgctccgcagcctgcgcaagcagtacccggacagcccgttcgccgtggtgttcgat
gccaagggcggcaccttccgcgacgaaatgttcgccgactacaaggccaaccggccgagc
atgcccgacgaaatgcgtgtgcagatcgagccgctgcatgccagcgtgcgcgccatgggc
ttcccgctactgtgcgtggaaggcgtggaagccgacgacgtgatcggtaccctggcccgc
agcagcgcggcggcggatcgtccggtggtgatctccaccggcgacaaggacatggctcag
ctggtcgacgggcatatcaccctggtcaacaccatgtccgagacgtccatggatgtggaa
ggcgtgaaggccaagttcggcgtcgcgccggagcagatcatcgacctgctggcgctgatg
ggcgactcctccgacaacatccccggagtcaagggcgtcggtgagaagaccgccgtagcc
ctgctggtgggggtcaacggcggcctgaaagagctgtatgccaacctcgacctggtgccg
accctgccgatccgcggggccaagaccctgccggccaagctgcttgaacatcaggaaatg
gcgttcctgtcctatcggctggcgaccatcaaggtcgatgtggagctggaggtcggcctt
gacgacctgcacctgggtgagccggatcgggacaagctgatcgaactgtatacctcgctg
gaattcaagggctggctcgacgagctgaaccgcgacgccaagcgcgccagtttgcaggaa
accgccgcgccagcggcgaccccggcggtggtcgaggatgcagcggctgaaaccgctgtg
ccggcccctgccgagccgcagtacgaaaccatcctcgacccggcgcgccttgacgtctgg
ctgaagaagctgcaggacgccaagctgttcgccttcgataccgagaccaccgggatcgac
gcccagcaggcgcaactggtcggggtgtccttttccgtgcaggccaacgaagcggcctac
attccgctgacccactcctacatcggcgtgccgcagcaactggaccgcgacagcgtattg
ctggcgctcaagccgctgctggaagacccgcagaaactcaaggtcggccagcacgccaag
ttcgacatgaacatcctcgccaactgtgcgatcggtggtgatcccgagcagggcatcagc
gtgcgtggcatcgctttcgacaccatgctcgaatcctatgtgctgaactccaccgcgact
cgccatgacatggacagcctggccaagaagtacctggactacgacaccgtcagcttccag
gacatcgccggcaaaggtgccaagcagctgaccttcgaccagattcccctggagcaggcc
ggccactacgccgccgaagatgccgacgtgaccctgcgtctgcaccaggcattgcacgag
cagttggccgcgattccgagcctggccagcgtgttgagcgacatcgagattccgttggtg
ccggtgctggcgcgcatcgagcgccagggtgccctggtcgacaaggacctgctgggcgtg
cagagcatcgagctgggcaacaagatggtcgagcttgagcgcgaggcgttcaagatcgcc
ggtgaagagttcaacctcggttcgcccaagcaactgggggtgatcctctacgagaaactc
ggtctgccggtgctgaagaaaaccggcaagggtcagccctcgactgccgaggaagtcttg
gccaagctggccgaggacgattatccgctgcccaaggtgctgatgcagtaccgttccatg
agcaagctcaagagcacctataccgaccgcctgccggagcagatcaacccgcgcaccggg
cgtatccacacctcctaccaccaggcggtggcggcgactggccggctgtcctccagcgac
ccgaacctgcagaacatcccggtgcgtaccgccgaaggccggcgcatccgtcaggcgttc
gttgcgcccaagggctacaagctgctggcggcggactattcgcagatcgagctgcggatc
atggcccatctgtcgaaggacgaggggctgctcaatgccttccgtgacaacctcgacgtg
cacacggccactgcggccgaggtgttcaaggtcgagttgaacgaggtcacctccgaccag
cgacgcagtgccaaggcgatcaactttggcctgatctacggcatgggcgcgcagaagctg
ggcaaggacatcggcgtcgacaccaagaccgccaaggcctatatcgacgtgtatttcgct
cgttaccccggggttcgcgaatacatggagcgcacccgtggtcaggcgtccgagcaaggt
tatgtcgagaccctgttcggtcgccggctgtacctgccggacatccactccaacaaaccc
caggagcgcgcggccgccgagcgtacggcgatcaacgcgccgatgcagggcacggcggcg
gatatcatcaagaaggccatggtcaaggtcgacgactggttgaccagttccggactggac
gccaaggtcattcttcaggtgcacgacgaattggtgctggaggtgcgcgaggatctggtg
gccgaggtcagcgagcagatccgcgtccacatgagcggtgcggcgcaactggatgtgccg
ttgctggtcgaggttggcgtgggcaacaactgggatgaggcgcactga

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