Pseudomonas fuscovaginae: NLK61_13620
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Entry
NLK61_13620 CDS
T10659
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pfuv Pseudomonas fuscovaginae
Pathway
pfuv03420
Nucleotide excision repair
pfuv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pfuv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NLK61_13620 (uvrD)
03430 Mismatch repair
NLK61_13620 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfuv03400
]
NLK61_13620 (uvrD)
Enzymes [BR:
pfuv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NLK61_13620 (uvrD)
DNA repair and recombination proteins [BR:
pfuv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NLK61_13620 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
NLK61_13620 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_22
AAA_11
Myb_DNA-binding_7
Motif
Other DBs
NCBI-ProteinID:
UUQ67621
LinkDB
All DBs
Position
complement(3018908..3021091)
Genome browser
AA seq
727 aa
AA seq
DB search
MRDDDLSLLLNSLNDAQRQAVAAPVGRQLVLAGAGSGKTRVLVHRIAWLIQVENASPYSV
LSVTFTNKAAAEMRHRIEQLMGISPAGMWVGTFHGLAHRLLRAHWQEAGLSQTFQILDSD
DQQRLVKRVIRDLGLDEQRWPARQAQWFINGQKDEGLRPQNIQASGDLFLATMRSIYEAY
EAACARANVIDFSELLLRALDLWRNNDGLLKHYQKRFRHILVDEFQDTNAVQYAWLRMLA
KGGDSLMVVGDDDQSIYGWRGAKIENIYQYSEDFPDAETIRLEQNYRSTAGILKAANALI
ANNTGRLGKELWTDGGDGEAINLYAAFNEHDEARYVVETIESALKTGLARSDIAILYRSN
AQSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINVPARG
IGEKTVEAIREHARHSNVSMWDAMAQLIANKGVTGRAASALGAFIELIENLAAKTQDTPL
HLMTQIVIEQSGLIAYHEAEKGEKGQARVENLEELVSAARNFEAAEGEEDLSPLAAFLGH
ASLEAGDSQADEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERR
LAYVGITRAMQNLVMTYAETRRLYGSETYNKVSRFVREVPKGLVQEVRLSNSVSRPFGGG
QQQSSSLFSGSAIPQTDFSLGQTVRHSIFGDGVILNFEGSGAQARVQVNFSEGSKWLMLG
YAKLEVI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgacgatctctcccttctgctgaactccctcaacgatgcccaacgccaggcc
gtagccgcccccgttggccgtcagttggtcctggctggcgccggctccggtaagacccgg
gtgctggtgcaccgtatcgcctggttgatccaggtcgaaaacgcctcgccctactccgtc
ctgtcggtgaccttcaccaacaaggccgctgccgaaatgcgccatcgcatcgagcagctg
atgggcatcagcccggccggcatgtgggtcggcaccttccacggcctggcgcaccgcctg
ttgcgggcgcactggcaggaagccgggctgagccagaccttccagatcctcgacagcgac
gaccagcagcggctggtcaagcgggtgatccgcgacctgggcctggacgagcagcgctgg
ccggcgcgccaggcgcagtggttcatcaacgggcaaaaggacgagggcctgcggccacag
aatatccaggccagcggcgacctgttcctggcgaccatgcgcagcatctacgaagcctac
gaggctgcctgcgcgcgcgccaacgtgatcgacttctccgagctgctgctgcgcgccctc
gacctgtggcgcaacaacgatgggttgctcaagcactaccagaagcgtttccggcacatc
ctggtggacgagttccaggacaccaacgccgtgcagtacgcctggctacgcatgctggcc
aagggtggcgacagcctgatggtggtcggcgacgacgaccagtcgatctacggctggcgc
ggggcgaaaatcgagaacatctaccagtattccgaagatttcccggacgccgagaccatc
cgcctggagcagaactaccgctccactgccggtatcctcaaggcggccaacgccctgatc
gccaacaacaccgggcgtctgggcaaggaactgtggaccgacggcggcgacggcgaggcg
atcaacctctatgccgccttcaacgaacacgacgaagcgcgctacgtggtcgaaaccatc
gaaagcgcgctgaagaccggtctggcgcgcagcgacatcgccattctctatcgctccaac
gcccagtcgcgggtgctggaagaagccctgctgcgcgagcgcattccctaccggatctac
ggtggtcagcgcttcttcgaacgggccgagatcaagaacgccatggcctacctgcgcctg
ctcgaaggtcgcggcaacgatgcggcgctggagcgggtgatcaacgttccggcccgaggt
attggtgagaagaccgtcgaagccatccgcgaacacgcccgccacagcaatgtgtcgatg
tgggacgccatggcccaactgatcgccaataaaggcgtcaccggccgtgccgccagcgcg
ctcggcgccttcatcgagctgatcgagaacctggcagcgaagacccaggatacgccgctg
cacctgatgacccagatcgtcatcgagcagtccgggctgatcgcctaccacgaagcggaa
aaaggcgagaaaggccaggcccgggtggaaaaccttgaggaactggtcagcgcggcgcgc
aacttcgaagccgccgagggcgaggaagacttgtcgccgctggccgcgttcctcggtcat
gcctctctggaagccggcgatagccaggccgacgagcatgaagacagcatccagctgatg
accctgcacagtgccaagggcctggaattcccctacgtgttcctggtgggcatggaagaa
ggcctgttcccgcacaagatgagcctggaagaaccgggccgccttgaggaggaacgtcgg
ctggcgtacgtgggcatcacccgggcgatgcagaacctggtcatgacctacgcggaaacc
cgtcggctgtatggcagcgagacctacaacaaagtctcgcgcttcgtacgcgaggtaccg
aagggcctggtgcaggaagtgcggttgtccaacagcgtcagtcgcccgttcggcggcggc
cagcaacagagcagcagcctgttcagcggcagcgccatcccgcagaccgatttcagcctg
ggccagacggtccgccacagcatcttcggcgacggcgtgatcctcaacttcgaaggctcg
ggtgcccaggcacgggtgcaggtgaacttcagcgaaggcagcaagtggctgatgctcggc
tacgccaagctggaagtcatctga
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