Pseudomonas fuscovaginae: NLK61_13970
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Entry
NLK61_13970 CDS
T10659
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
KO
K11891
type VI secretion system protein ImpL
Organism
pfuv Pseudomonas fuscovaginae
Pathway
pfuv02025
Biofilm formation - Pseudomonas aeruginosa
pfuv03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pfuv00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
NLK61_13970 (tssM)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
NLK61_13970 (tssM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pfuv02044
]
NLK61_13970 (tssM)
Secretion system [BR:
pfuv02044
]
Type VI secretion system
Imp/Vas secretion system core components
NLK61_13970 (tssM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IcmF-related_N
IcmF-related
IcmF_C
IcmF_helical
T7_gp14
nSTAND_NTPase5
VirB8
Motif
Other DBs
NCBI-ProteinID:
UUQ67687
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Position
3100392..3103895
Genome browser
AA seq
1167 aa
AA seq
DB search
MKAFFGFVIRWVIPVLGLIALSLIIWFVGPLLEMLVPQGRRWALIILIFAIWIGYRLFRL
IQARRQAAKVMQSLAADTPPDAASVATAEELATLRQRMDEALVLLKKARLGGDERRNLYE
LPWYVIIGPPGSGKTTALVNSGLHFPLAAQLGAGAIRGVGGTRNCDWWFTDEAVLLDTAG
RYTTQDSHAQVDKAAWLGFLDLLKTQRSRRPIDGAFIAISLSDLLLGTDAERAAHAVAIR
ARIQELYTQLGVRFPIYLMLTKLDLVPGFMEFFDALSKEERAQVWGTTFTLDDGKHAESP
LVHFKGEFAALEQRLNERLVERLQQERDPARRDLIYGFPQQFGALRESLQSFLDGVFKPN
AYEDRALLRGVYFTSGTQEGSPIDRLIGAMAQSMSLDRQHLARQSGTGRSYFIEKLFTAV
AFAERGLVGVNPKVERRRKWLARGVLAATVAVVLLVSTLWLISYKSNQAYIAQVDQKVAP
LAQSVQNLSPAQRDVLAVLPLLNAVRHLAGDAPGWSEGLGLYQGDMLEAESASVYRKLLI
AVFAPRLVTRVEEQLRSGGSSDFLYEGLKAYLMLADNEHYDPEFIKAWIALDWDRNLPRD
LPPEQRLALGEHLKALFDRHPPNARLDERLIDDLRRQLQQLPVAQRVYDRVKRQKLPEGV
PDFRLSDAAGRDAALVFSRKSGKPLSEPLSGFFTAKGYRQAFLLASLNQAGTLAEEQWVL
GRDQGEQQNVASLAADVRRLYFQDYQRQWDALLADIDFVPITSVAQAADVLRVISGPTSP
LKKLLVAVAKETDLQQEERLLAAQGKKVDSGVDQIKQRLGSMLGQDQPSGDAPAAPAEDP
VSAHFAELNALVSKGEGEPAAIDSLLADMNALYVQVSAMVGASGDALLGEAKNQAAGAAA
RVSLNAERQPALVQGLVKSVVSSTTNSMMGGVRNQLNAAWVSEVVNVYRQSLSGRYPLSP
GSARDATLDDFGQFFGVGGVMDNYFRKYLQPYVDTSTATWRWQPGAAQKLGISPGVLQTF
QRAAAIRDAFFRSGGTQPIVRFELKPVAMDASITQFLLDLDGQQISYDHGPSRPVAMQWP
NPGSIGVVRLSISPPSATGRSGVTLDGPWAWFRLLEQSDLVAGNSPDRFNLRLRVDGASI
SYELRANSAFNPFKSRVLSGFSLPERL
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggcgtttttcggttttgtcattcgctgggtgatccctgtgctggggctgatcgcc
ctgagcctgatcatctggttcgtcggcccgctgctcgaaatgctggtgccgcaagggcgg
cgctgggcgttgatcatcctgatcttcgcgatctggatcggttatcgcctgttccgcctg
atccaggcccggcgccaggcggcgaaagtcatgcagagtctggccgccgacacaccaccg
gatgcggccagtgtcgccaccgccgaagagctggcgaccctgcgccagcgcatggacgag
gcgctggtgctgttgaagaaggcccggctcggaggcgatgaacgccgtaacctgtatgag
ctgccgtggtacgtgatcatcgggccacccggctcgggcaagaccaccgcactggtcaac
tccggtctgcatttcccgcttgccgcgcaactcggcgccggggcgatccggggtgtcggc
ggtacgcgcaactgcgactggtggttcaccgacgaagccgtgctgctcgacaccgctggc
cgctacaccacccaggacagtcatgcccaggtggacaaggcggcctggctgggctttctc
gatctgctcaagacccagcgttcgcgccgtcctatcgatggtgcgttcattgccatcagt
ctttccgatctgctgctgggtaccgatgccgagcgcgcggctcacgccgtggcgatccgg
gcgcggatccaggagttgtatacccagctcggcgtgcgcttcccgatttacctgatgctg
accaagctcgacctggtgccggggttcatggagttcttcgacgccctgagcaaggaagag
cgggcgcaggtgtggggcacgacctttaccctggacgacggcaagcacgccgaaagcccg
ctggtgcacttcaagggcgagttcgccgcattggaacagcggctcaacgagcgcctggtg
gaacgtctgcaacaggagcgcgacccggcgcggcgcgatctgatctacggcttcccgcag
cagttcggcgcgctgcgcgagtccctgcagagcttcctcgacggtgtattcaagcccaat
gcctatgaagaccgggcgctgttgcgcggcgtgtacttcaccagcggtacccaggaaggc
agcccgatcgaccgactgatcggcgccatggcccagagcatgagcctggaccgccagcac
ctggcccgccagagtggtaccgggcgcagttacttcatcgaaaaactgttcactgccgtg
gcctttgccgagcgcggcctggtcggggtcaaccccaaggtcgagcggcggcgcaagtgg
ctggctcgcggcgtattggcggcgacggtcgcggtggtgttgctggtcagtaccttgtgg
ttgatcagctacaagtccaaccaggcctatatcgcccaggtcgaccagaaggtcgcgccg
ctggcccagagtgtgcagaacctcagcccggcacaacgtgacgtgctggcggtgttgccg
ctgctcaatgcggtcaggcacctggccggggatgcaccgggctggtccgagggcctgggc
ttgtaccagggcgacatgctcgaagcggagtccgccagcgtctatcgcaagctgctgatc
gcggtgttcgcgccgcggctggtgacccgtgtcgaagaacagttgcgcagtggcggcagt
tcggacttcctctacgagggcttgaaggcctacctgatgctggccgacaacgagcactat
gacccggagttcatcaaggcctggatcgccctcgactgggaccgcaacctgccacgggac
ctgccgccggagcagcgcctggccctgggtgaacacctcaaggcgttgttcgatcggcat
ccgccgaatgcccggctggatgagcgactgatcgacgacctgcgccgccagttgcagcaa
ttgccggtggcgcagcgggtctacgaccgggtcaagcgccagaagctgcccgagggtgta
ccggatttccgcctgagtgacgccgccggccgcgacgccgcgctggtgttcagccgcaag
agcggcaagccgctgagtgagccgctgagcggtttcttcaccgccaagggttatcgccag
gcattcctgctggccagtctgaaccaggccggaaccctggctgaagaacagtgggtgttg
ggccgcgaccagggcgagcagcagaacgtcgccagcctggcggcggatgtgcgccgtctg
tacttccaggattaccagcgccagtgggatgccttgctggcggatatcgacttcgtgccg
atcaccagcgtggcccaggcggccgatgtgctgcgggtgatctccggtccgacttcgccg
cttaaaaagctgctggtggcggtggccaaggaaaccgatctgcagcaggaagaacgcctg
ttggcggcccagggcaagaaggtcgatagtggtgtcgaccagatcaagcaacgcctgggc
tcgatgcttggccaggatcaaccgtccggcgatgcgccagcggcgccggccgaagatccg
gtcagcgcgcatttcgccgaactcaacgccctggtcagcaagggcgagggcgaaccggca
gccatcgatagcctgctggcggacatgaacgcgctgtatgtgcaggtcagtgcgatggtc
ggtgccagcggcgatgccctgctcggtgaagcgaagaaccaggcggcgggcgctgcggcg
cgggtcagcctgaatgccgagcgccagccagcgctggtccaggggctggtcaagtcggta
gtcagctcgaccaccaacagcatgatgggcggggtgcgtaaccagttgaacgcggcctgg
gtcagcgaggtggtgaacgtctaccggcagtccctcagcggccgttatccgctgtctccc
ggcagcgcccgggacgcgaccctcgacgacttcggccagttctttggcgtgggcggggtg
atggacaactacttccgcaagtacctgcaaccctacgtcgacacctcgaccgcgacctgg
cgctggcagccgggtgcggcgcagaaactggggatttcgccgggtgtgttgcagaccttc
cagcgcgctgcggcgattcgtgatgcgttcttccgctccggcggtacccagccgatcgta
cgtttcgaactgaagccggtggcgatggatgcctcgatcacccagttcctgctcgacctc
gacggccagcagatcagctatgaccacggtccgagccggccggtggcgatgcagtggccg
aatccgggcagtatcggcgtggtgcgtctgtcgatttcgccgccttcggccaccggtcgt
tccggcgtgaccctggacggcccgtgggcctggttccgtctgctggagcagtcggacctg
gtggccggcaactcgccggaccgcttcaacctgcgcctgcgggtcgatggggcgagcatc
tcctacgagttgcgcgccaacagcgccttcaacccgttcaagagccgcgtgctcagtggc
ttcagcctgccggagcgcctatga
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