Pseudomonas fuscovaginae: NLK61_14835
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Entry
NLK61_14835 CDS
T10659
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
pfuv Pseudomonas fuscovaginae
Pathway
pfuv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfuv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NLK61_14835 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfuv03021
]
NLK61_14835 (rho)
03019 Messenger RNA biogenesis [BR:
pfuv03019
]
NLK61_14835 (rho)
Transcription machinery [BR:
pfuv03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
NLK61_14835 (rho)
Messenger RNA biogenesis [BR:
pfuv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NLK61_14835 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_25
AAA_22
S1CSD-TOTE-2
NACHT
Motif
Other DBs
NCBI-ProteinID:
UUQ62579
LinkDB
All DBs
Position
3295630..3296889
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKQKPITELLELAEQMGIENMARSRKQDVIFSLLKKHAKSGEEISGDGVLEILQD
GFGFLRSSDASYLAGPDDIYVSPSQIRRFNLRTGDTIVGKIRPPKEGERYFALLKVDTIN
YDRPENAKNKILFENLTPLFPNERLKMEAGNGSTEDLTGRVIDLCAPIGKGQRGLIVAPP
KAGKTIMLQNIAANITRNNPECHLIVLLIDERPEEVTEMQRTVRGEVVASTFDEPPTRHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALEKPKRF
FGAARNIEEGGSLTIIATALVETGSKMDEVIYEEFKGTGNMELPLDRRIAEKRVFPAINI
NRSGTRREELLTADDELQRMWILRKLLHPMDEIAAIEFLVDKLKTTKTNDEFFLSMKRK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgactgaactcaagcaaaagccgattaccgaactgctcgaattggccgaacaa
atgggcatagagaacatggcccgttcgcgcaagcaggatgtgattttctccctgctgaaa
aagcacgcgaaaagcggtgaggaaatctctggtgatggcgtgctggagatcctccaggac
ggcttcggcttccttcgttcttccgacgcgtcctacctggccggtcccgatgacatctac
gtgtcgccgagccagatccgtcgtttcaacttgcgcaccggtgacaccatcgttggcaag
atccgccctcccaaggaaggcgagcgttatttcgccctgctcaaggtcgacacgatcaac
tacgatcgtccggaaaacgccaagaacaagattctgttcgaaaacctgacgccgctgttc
cccaacgagcgcctgaagatggaagccggcaacggttccaccgaagacctcactggccgc
gtcatcgacctctgcgccccgatcggcaagggccagcgtggcctgatcgtcgccccgccg
aaagcgggcaagaccatcatgctgcagaacatcgcggccaacatcacccgtaacaatccc
gagtgccacctgatcgtcctgttgatcgacgagcgcccggaagaagtgaccgagatgcag
cgcaccgtgcgcggcgaagtggttgcctcgaccttcgacgagccgccgacccgccacgtg
caggtggccgagatggtcatcgagaaagccaagcgcctggtcgagcacaagaaggacgtg
gtgatcctgctggactccatcacccgtctggcccgtgcctacaacactgtgatcccgagc
tccggcaaggtcctgaccggtggtgtcgatgcccacgccctggagaagccgaagcgtttc
ttcggtgccgcgcgtaacatcgaagaaggcggttcgctgaccatcatcgccaccgcactg
gttgaaaccggttcgaagatggacgaagtgatctacgaggagttcaagggcaccggtaac
atggagctgccactggaccgccggattgctgaaaaacgcgtcttcccggccatcaacatc
aaccgttccggcacccgtcgcgaagagttgctgacggctgacgatgagctgcagcgcatg
tggatcctgcgcaagctgctgcatccgatggatgaaattgccgccatcgagttcctggtc
gacaagctgaaaacgaccaagaccaacgatgagttcttcctgtcgatgaaacgcaagtaa
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