Pseudomonas fuscovaginae: NLK61_17535
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Entry
NLK61_17535 CDS
T10659
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pfuv Pseudomonas fuscovaginae
Brite
KEGG Orthology (KO) [BR:
pfuv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfuv03016
]
NLK61_17535 (truB)
Enzymes [BR:
pfuv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NLK61_17535 (truB)
Transfer RNA biogenesis [BR:
pfuv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NLK61_17535 (truB)
Prokaryotic type
NLK61_17535 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
UUQ63083
LinkDB
All DBs
Position
3882134..3883051
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AA seq
305 aa
AA seq
DB search
MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKGYETLMQLGKTTTTADAEGEVLQTRPVTVGRADIEAVLPDFRGEIS
QIPPMYSALKRDGQPLYKLARAGEVVEREPRSVTIARLELLASEGDTARLAVDCSKGTYI
RTLVEDIGERLGCGAYVAELRRTQAGPFSLAQTVTLEELEAVHAEGGNEAVDRFLMPSDS
GLLDWPLLKFSEHSAFYWLNGQPVRAPDAPKYGMVRVQDHNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaaacgtattcgtcgcaacgtcagcggcatcatcctgctggacaagccg
ctcgggttcacctccaacgcggcgttgcagaaggtccgctggctgctcaacgccgagaag
gccggtcataccggcagcctcgatccgttggctaccggcgtgctgccgctgtgctttggc
gaggccaccaagttctcgcagtacctgctcgattccgacaagggttatgaaaccctcatg
cagttgggcaagaccaccaccacggcggacgccgagggcgaggttttgcagactcgtcct
gtgaccgttggtcgtgccgatatcgaagcggtcctgccggattttcgtggggaaatcagt
cagatacccccgatgtactcggcactcaagcgcgatgggcaaccgctttacaagttggcg
cgtgcaggggaagtagtggagcgcgaaccgcgttctgttactattgcgcgcttggaattg
ctggccagcgaaggcgatactgcccgactggcggtggactgcagcaagggcacctatatt
cgtaccctggtggaggatatcggtgagcggctcggttgcggtgcgtacgtcgccgaactg
cgtcggacccaggccggacctttcagcctggcccagacggtgacgctcgaagagctggaa
gccgtccatgccgaaggtggtaatgaagcggtcgatcgcttcctgatgccatcggacagt
gggttgctggattggcctctgctcaagttttccgagcacagtgcgttctactggctcaac
ggccagccagtacgtgccccggacgcgccgaagtacggcatggttcgggtacaggatcat
aatggtcgcttcatcggtatcggtgaagtgagcgaagacgggcgcatcgcgccgcgtcga
cttattcggtcagaatga
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