Pseudomonas fuscovaginae: NLK61_17545
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Entry
NLK61_17545 CDS
T10659
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pfuv Pseudomonas fuscovaginae
Pathway
pfuv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfuv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NLK61_17545 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfuv03019
]
NLK61_17545 (pnp)
03016 Transfer RNA biogenesis [BR:
pfuv03016
]
NLK61_17545 (pnp)
Enzymes [BR:
pfuv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NLK61_17545 (pnp)
Messenger RNA biogenesis [BR:
pfuv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NLK61_17545 (pnp)
Transfer RNA biogenesis [BR:
pfuv03016
]
Prokaryotic type
tRNA degradation factors
NLK61_17545 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
KH_N4BP1_2nd
KH_2
OB_RRP5_4th
S1_2
Motif
Other DBs
NCBI-ProteinID:
UUQ63085
LinkDB
All DBs
Position
3883662..3885767
Genome browser
AA seq
701 aa
AA seq
DB search
MNPVIKKFQFGQSTVTLETGRIARQASGAVLVTVDDDVSVLVTVVGAKQADPGKGFFPLS
VHYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGFMNEVQVVCTVVST
SKKTDPDIAAMIGTSAALAISGIPFDGPIGAARVAFHESTGYLLNPTYEQLKASSLDMVV
AGTAEAVLMVESEAKELTEDQMLGAVLFAHDEFQSVIQAVKELAAEAAKPTWSWAPQAEA
TELLGAIRAEFGEAISQAYTITVKADRYARLGELKDQVVAKLSGEEGQPSAADVKAAFGE
IEYRTVRENIVNGKPRIDGRDNRTVRPLNIEVGVLPKTHGSSLFTRGETQALVVATLGTA
RDAQLLDTLEGEKKDPFMLHYNFPPFSVGECGRMGGAGRREIGHGRLARRSVQAMLPSDS
EFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAVLT
DILGDEDHLGDMDFKVAGTAKGVTALQMDIKIKGITEEIMEIALGQALEARLNILGQMNQ
VIGQSRSELSSNAPTMISMKIDTDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG
ETKEAAEAARQRVLGITAEAEIGKIYLGKVERIVDFGAFVNILPGKDGLVHISMLSDARV
EKVTDILKEGQEVEVLVLDVDNRGRIKLSIKDVAAAKASGV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggtaatcaaaaaattccagttcggtcagtcgaccgttaccctcgagactggt
cgcatcgctcgccaggcctccggcgcagtgctggtcaccgttgacgacgacgtcagcgta
ttggtgaccgttgtcggtgccaagcaagccgatccgggcaagggtttcttcccactgtcc
gtgcactaccaggaaaagacctacgctgccggcaagatccctggcggcttcttcaagcgt
gaaggccgtccttccgaaaaagaaaccctgacttcgcgcctgatcgaccgtccgatccgc
ccgctgttccctgaaggcttcatgaacgaagtgcaggttgtctgcaccgtcgtctccacc
agcaagaagaccgatccggacatcgctgcgatgatcggtacctcggctgccctggccatt
tccggtattccgttcgatggcccgattggcgccgctcgcgtagctttccacgaaagcacc
ggttacctgctgaacccgacttacgagcaactgaaagcgtcgagcctggacatggtcgtc
gccggtactgccgaagcggtactgatggttgagtcggaagccaaggaactgaccgaagac
cagatgctgggcgcggtactgttcgcccacgacgaattccagtccgttatccaggccgtc
aaagagctggccgccgaagctgccaagccaacctggagctgggctccacaggcagaagcc
accgaactgctgggtgctatccgcgccgaattcggcgaagcgatctcccaggcctacacc
atcaccgtcaaggccgaccgttacgctcgtctgggcgagttgaaggaccaggtggttgcc
aagctgtcgggtgaagaaggccagccttcggctgccgacgtgaaagccgctttcggcgaa
atcgaataccgcaccgttcgcgaaaacatcgtcaacggcaagccacgtatcgacggtcgc
gacaaccgcactgtacgtccgctgaacatcgaagtcggtgtcctgccgaagacccacggt
tcgtcgctgttcacccgtggcgaaacccaggccctggtcgttgccactctgggtaccgct
cgcgatgcgcagttgctggacaccctggaaggcgagaaaaaagaccccttcatgctgcac
tacaacttcccgccgttctcggtgggcgagtgtggccgcatgggtggtgccggtcgtcgt
gaaatcggtcacggccgtctggcccgtcgttcggtccaggccatgctgccaagcgacagc
gaattcccgtacaccatccgtgtggtatcggaaatcaccgaatccaacggttccagctcc
atggcttcggtctgcggtgcttccctggccctgatggatgccggtgtaccgatgaaggcg
ccagtagccggtatcgccatggggctggtgaaggaaggtgagaaattcgccgtcctgacc
gacatcctgggcgatgaagaccacctgggcgacatggacttcaaggtagccggtaccgcc
aagggcgtcaccgcgctgcagatggacatcaagatcaagggcatcaccgaagaaatcatg
gaaatcgctctgggccaagccctggaagcgcgcttgaacatcctcggtcagatgaaccag
gtcattggccagtctcgtagcgaactgtcgtccaatgctccgaccatgatctcgatgaag
atcgacaccgacaagatccgtgacgtgatcggtaaaggtggcgcgaccatccgtgcgatc
tgcgaagaaaccaaggcttcgatcgatatcgaagacgatggctcgatcaagatcttcggt
gaaaccaaggaagcggccgaggcagctcgccagcgcgtcctgggcatcactgccgaggcc
gagatcggcaagatctacctgggcaaggtagagcgtatcgtcgacttcggtgcgttcgtc
aacatcctgccaggcaaggatggtctggtgcacatctcgatgctgagcgacgctcgcgta
gagaaagtcaccgatatcctgaaggaaggccaggaagttgaagtgctggtgctggacgtg
gacaaccgcggtcgcatcaagctgtccatcaaggacgtcgctgcggccaaggcatcgggc
gtttaa
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