Pseudomonas fuscovaginae: NLK61_18765
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Entry
NLK61_18765 CDS
T10659
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
pfuv Pseudomonas fuscovaginae
Pathway
pfuv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfuv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NLK61_18765 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfuv03019
]
NLK61_18765 (rhlB)
Enzymes [BR:
pfuv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NLK61_18765 (rhlB)
Messenger RNA biogenesis [BR:
pfuv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NLK61_18765 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
UUQ63308
LinkDB
All DBs
Position
complement(4145474..4146934)
Genome browser
AA seq
486 aa
AA seq
DB search
MLKALKKIFGKGEAEQLASGPGTPTPNPESRLTGQSSEHAEPATKPKSQPAAAQDLSSQT
RVEPPKTTPARRERAPKPKPLPWKLEDFVVEPQEGKTRFHDFKLSPELMHAIQDLGFPYC
TPIQAQVLGYTLAGKDAIGRAQTGTGKTAAFLISTITQLLQTPPPAERYMGEPRALIIAP
TRELVVQIAKDAADLTKYTGLNVMQFVGGMDFDKQLKQLEARHCDILVATPGRLLDFNQR
GEVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPPKSERQTLLFSATFTEDVMNLARQ
WTTDPAIVEIEAQNVANQNVEQHIYAVASADKYKLLYNLVNDNGWERVMVFANRKDEVRR
IEERLVRDGVNAAQLSGDVPQHKRIKTLEGFREGKIRVLVATDVAGRGIHIDGISHVINF
TLPEVPDDYVHRIGRTGRAGADGVSISFAGEDDSYQLPSIEELLGRKISCEMPPTELLRP
VVRQRP
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
gtgctcaaagcactcaaaaaaatattcggtaaaggcgaggctgagcagctcgcatcaggt
cctggcactccgacccccaacccggaaagccgcctgaccggccagtcgtcggaacacgcc
gagcccgcgacaaaaccgaaaagccagccggcagccgcacaagatctatccagccaaacc
cgcgtcgagccgcccaaaaccacgccagcacgccgcgaacgggcaccgaagccaaaaccg
ctgccgtggaaactcgaggacttcgtcgtcgagccccaggagggcaagacccgcttccac
gacttcaagttgtcgccggaactgatgcatgccattcaggatcttggcttcccctactgc
acgccgatccaggcgcaggtattgggttacaccctggccggcaaggatgcgatcggtcgc
gcccagaccggcaccggcaagaccgccgccttcctgatctcgaccattacccaactgctg
cagacgccaccgccggccgagcgttacatgggcgaaccacgggcactgatcatcgcgcca
acccgcgaactggtggtacagatcgccaaggacgccgccgacctcaccaaatacaccggc
ctcaacgtcatgcagttcgtcggcggcatggacttcgacaagcagctcaagcaacttgaa
gcccgccattgcgacattctcgtcgcgacaccaggtcgcctgctggatttcaaccagcgt
ggcgaagtgcacctggacatggtcgaggtgatggtgctggacgaagccgaccgcatgctc
gatatgggcttcatcccacaagtacgccagatcattcgccagaccccgccgaagagcgag
cgccagaccctgctgttctcggcaaccttcaccgaggatgtgatgaaccttgcccggcaa
tggaccaccgaccctgcgatcgtcgagatcgaagcgcagaacgtcgccaaccagaacgtc
gagcagcacatctacgccgttgcctcggccgacaagtacaagctgctgtacaacctggtc
aacgacaacggctgggagcgggtgatggtcttcgccaaccgcaaggacgaagtacggcgc
atcgaggaacggctggtgcgtgatggcgtgaatgccgcgcaactttccggcgacgtgccg
cagcacaagcgcatcaagaccctggaaggtttccgcgaaggcaagatccgcgtgttggtg
gccaccgatgtcgccggtcgcgggattcatatcgacggcatcagccacgtgatcaacttc
accctgccggaagtgccggatgactatgtacaccgcatcgggcgtaccggtcgtgccggg
gccgatggggtgtccatcagtttcgccggtgaggatgactcctaccagttaccgtcgatc
gaggaactgctggggcgcaagatcagttgcgagatgcctcccacggaattgctgcgaccg
gtagtccgtcagcgcccctga
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