Pseudomonas fuscovaginae: NLK61_21590
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Entry
NLK61_21590 CDS
T10659
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pfuv Pseudomonas fuscovaginae
Pathway
pfuv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfuv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NLK61_21590 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfuv03019
]
NLK61_21590 (recQ)
03400 DNA repair and recombination proteins [BR:
pfuv03400
]
NLK61_21590 (recQ)
Enzymes [BR:
pfuv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NLK61_21590 (recQ)
Messenger RNA biogenesis [BR:
pfuv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NLK61_21590 (recQ)
DNA repair and recombination proteins [BR:
pfuv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NLK61_21590 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
HTH_40
ResIII
Sigma70_r1_2
Sigma70_r4_2
HTH_23
GerE
Motif
Other DBs
NCBI-ProteinID:
UUQ63823
LinkDB
All DBs
Position
4749837..4751966
Genome browser
AA seq
709 aa
AA seq
DB search
MLEQAQRVLKDIFGYDSFRGRQGAIIERVASGGDALVLMPTGGGKSLCFQVPALLRDGLA
VVVSPLIALMDDQVATLEELGVAAAALNSTLSAEQQRELAARIRRGEVKMLYLAPERLVQ
PRMLAFLQNLDIALFAIDEAHCVSQWGHDFRPEYLQLGQLAELFPHVPRIALTATADKRT
REEIVNRLHLQNAERFLSSFDRPNIFYRIVPKEQPRKQLLAFLSQRRADSGIVYCLSRKK
VDEVAALLCEQGFPALPYHAGLPSETRADNQRRFLNEEGLIMVATIAFGMGIDKSNVRFV
AHLDLPKSLEAYYQETGRAGRDGLPADAWMAYGLQDVVMLKQMLQNSEGDERHKRLEHHK
LDAMLALCEETRCRRQTLLAYFDEDMPQPCGHCDNCVDGVQTWDATEPARQALSAIYRTG
QRYGVGHLVDVLLGKENDKVRSFGHQHLAVFGVGKSLSEGEWRSLFRQLVARGLADIDLE
GYGGLRLSDNCRALLRGEVTLELRRDLKPQTAAKSVSASPASQLVRGEEREQWEALRALR
RKLAQEHAVPPYVIFPDSTLLEMLRSQPTTMAQMAKVSGVGARKLERYGEAFLEVLGGEA
ETPKAVADIRHELISLARAGMTPLQIAGQLQCSEKNVYTLLAEAIGRQQLSLEQALDLPE
DLLGEIQDTFLDGEGELPAVSEIAERFVGRVPEGVLYCVRAALQAEFEL
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaacaggctcaacgcgtcctcaaggacatcttcggttacgacagctttcgcggt
cgccagggtgccattattgagcgcgtggccagcggcggcgatgccttggtgctgatgccg
accggcggcggcaaatccttgtgtttccaggttccggccctgctgcgtgacggcttggcg
gtggtggtatcgccgttgatcgcgttgatggacgaccaggtcgcgacgctggaagaactc
ggcgttgcagcggcggcactgaactcgacgctgagcgccgagcagcagcgcgagctggcg
gcgcgcattcgccgtggcgaagtgaaaatgctctacctggcgcccgagcgcctggttcag
ccgcgcatgctggcgttcctgcagaacctcgatattgccctgttcgccatcgacgaggcg
cattgcgtttcgcaatggggccatgacttccggcccgaatacctgcagctcggtcaactg
gccgagctgtttccccatgtgccgcgtatcgcgctgaccgccaccgccgacaagcgtacc
cgcgaagaaatcgtcaatcgcctgcacctgcagaacgccgaacggtttctctccagtttc
gaccggccgaacatcttctaccgcatcgttcccaaggagcagccacgcaagcagttgctg
gcgttcctgtcgcagcgccgtgccgactcggggatcgtctactgcctgtcgcgcaagaag
gtcgatgaagttgccgcgctgctctgcgagcagggctttccggccttgccgtatcacgcc
gggctgccttctgaaacccgggcggacaaccagaggcgtttcctcaacgaggaagggctg
atcatggtcgcgaccattgccttcggcatgggtatcgacaagtccaacgtgcggttcgtt
gctcacctcgacctgcccaagtccctggaagcctattaccaggagaccggtcgggccggt
cgcgacggcttgccggcagatgcctggatggcttacggcctgcaggatgtggtgatgctc
aagcagatgttgcagaactccgagggtgacgaacgccacaagcgtctggagcatcacaag
ctcgacgcgatgctggcactgtgcgaagagacccgctgccgtcgccagacgctgctggcc
tatttcgacgaggacatgccgcagccctgtggtcactgtgacaactgtgtcgatggcgta
cagacctgggacgccaccgagcccgcacgacaggcgctgtcggcgatctaccggaccgga
cagcgttatggtgtcggccacctggtcgatgtgctgctgggcaaggagaacgacaaggtt
cgcagcttcggtcaccagcatctggcggtgttcggcgtgggcaagtcgctcagcgagggc
gagtggcgttcgctgttccgccaactggtggcgcggggcttggccgatatcgacctcgaa
ggctatggcggcctgcgcctgagtgacaactgccgggccctgctgcggggcgaggtcact
ctggaactgcgtcgcgacctcaagccgcagaccgctgccaagagtgtctccgccagcccg
gccagccaactggtacgtggcgaggagcgcgaacaatgggaagccttgcgtgccctgcgc
cgcaagctggcccaggaacatgccgtgccgccctatgtcatcttccccgactccacattg
ctggaaatgctccgcagccaaccgacgaccatggcgcagatggccaaggtcagcggtgtc
ggcgcccgcaagctggagcgttatggcgaggccttcctcgaggtactgggcggcgaggcg
gagacgcccaaggcggtcgccgatatccgtcacgaactgatcagcctggcgcgtgccggc
atgaccccgttgcagatcgccggccagttgcagtgctcggagaagaatgtctacacgctg
ctggccgaggccatcggtcgccagcagttgtccctggagcaggccttggatctgcccgag
gatctgctgggcgaaattcaggatacctttctcgatggcgagggcgagttaccggccgtg
agcgagatcgccgaacggttcgtcgggcgcgtgcccgaaggtgtgctgtattgcgtgcgg
gcagccctgcaagccgaattcgaactctga
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