Pseudomonas fuscovaginae: NLK61_22840
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Entry
NLK61_22840 CDS
T10659
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pfuv Pseudomonas fuscovaginae
Pathway
pfuv00071
Fatty acid degradation
pfuv00280
Valine, leucine and isoleucine degradation
pfuv00310
Lysine degradation
pfuv00362
Benzoate degradation
pfuv00380
Tryptophan metabolism
pfuv00410
beta-Alanine metabolism
pfuv00640
Propanoate metabolism
pfuv00650
Butanoate metabolism
pfuv00907
Pinene, camphor and geraniol degradation
pfuv00930
Caprolactam degradation
pfuv01100
Metabolic pathways
pfuv01110
Biosynthesis of secondary metabolites
pfuv01120
Microbial metabolism in diverse environments
pfuv01200
Carbon metabolism
pfuv01212
Fatty acid metabolism
Module
pfuv_M00087
beta-Oxidation
pfuv_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pfuv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
NLK61_22840 (fadB)
00650 Butanoate metabolism
NLK61_22840 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
NLK61_22840 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
NLK61_22840 (fadB)
00310 Lysine degradation
NLK61_22840 (fadB)
00380 Tryptophan metabolism
NLK61_22840 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
NLK61_22840 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
NLK61_22840 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
NLK61_22840 (fadB)
00930 Caprolactam degradation
NLK61_22840 (fadB)
Enzymes [BR:
pfuv01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
NLK61_22840 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
NLK61_22840 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
NLK61_22840 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
NLK61_22840 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
UUQ64058
LinkDB
All DBs
Position
5019153..5021300
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTIKADASVKGVIVSS
GKDVFIVGADITEFVDNFKLPDAELVAGNLEANRIFSDFEDLAVPTVAAINGIALGGGLE
MCLAADLRVMSASAKIGLPEVKLGIYPGFGGTVRLPRLIGVDNAIEWIAAGKENRAEDAL
KVGAVDAVVAPEQLQQAALDLVKRAISGEIDYKAKRQPKLDKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKLAKTSAAQSLIGLFLNDQEL
KKKAKAYDEIAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEGQVK
EDAVLASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEQAVATTVA
YAKKMGKNPIVVNDCPGFLVNRILFPYFGGFAKLVSAGVDFVRIDKIMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDALYEAKRLGQKNGKGFYAYETDKRGKQ
KKVADPSVLEVLKPIIYEQREVTDEDIINWMMIPLCLETVRCLEDGIVDTAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGALYHPTAKLREMAKTGQRFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaattg
aaattcgacctcaagggtgagtccgtcaacaagttcaaccgtctgaccctgaacgaactg
cgtcaggcggtggacaccatcaaggccgatgcctcggtcaagggtgtgatcgtcagcagt
ggcaaggacgtgttcatcgtcggcgccgacatcaccgaatttgtcgacaacttcaagttg
ccagatgctgaactcgtggcgggtaacctcgaagccaacaggatcttcagcgatttcgaa
gacctggccgttccgaccgttgccgcgatcaacggcatcgccctgggtggcggtctggaa
atgtgcctggctgcggatctgcgggtcatgtccgccagcgccaagatcggcctgccggaa
gtcaaactgggcatctatccaggctttggcggtaccgttcgtctgccacgtctgatcggt
gtggataacgccatcgagtggattgccgccggcaaggaaaaccgtgccgaggacgccctg
aaagtcggcgccgtcgatgccgtggttgcccctgaacaactgcagcaggctgccctggac
ctggtcaagcgcgccatctctggcgagatcgactacaaggccaagcgtcagcccaagctg
gacaagctcaagctcaacgccatcgagcagatgatggccttcgaaaccgccaagggtttt
gtcgcgggtcaagccggtccgaactacccggcgccggtcgaagccatcaagaccatccag
aaagccgccaacttcggtcgtgacaaggcgctggagatcgaagccgcaggtttcgtgaaa
ctggccaagacctcggctgcgcagagtctgatcggtctgttcctgaacgatcaggaactg
aagaaaaaggccaaggcctacgacgaaatcgccaaggacgtgaagcaggccgccgtactc
ggtgccggcatcatgggtggcggtatcgcctatcagtcggcatccaagggcacgccgatc
ctgatgaaggacatcaacgagcacggtatcgagcagggcctggcggaagccgccaagctg
ctggtcggccgcgtcgacaagggccgcatgaccgcggcgaagatggccgaagtgctcaac
ggtattcgtccgacgctgtcctacggtgacttcggccacgtcgacctggtggtcgaggcg
gtcgtcgagaacccgaaggtcaagcaggcggtactggctgaagtggaaggccaggtcaag
gaagatgccgtgctggcgtccaacacctcgaccatttccatcagcctgctggccaaggcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtgatccgtggcgagaagtccagcgaacaggcggtcgccaccaccgtggcc
tacgccaagaagatgggcaagaacccgatcgtggtcaacgactgcccgggcttcctggtc
aaccgcatcctgtttccgtacttcggcggtttcgccaagctggtcagtgccggtgtggac
ttcgtccgtatcgacaagatcatggagaagttcggctggccgatgggtcctgcgtacctg
atggacgtggtcggtatcgacaccggtcaccatggtcgtgacgtgatggccgaaggcttc
ccggatcgcatgaaggacgaccgtcgttcggctgtcgatgcgctgtacgaggccaagcgc
ctgggtcagaagaacggcaagggcttctacgcctacgagaccgacaagcgcggcaagcag
aagaaggtggccgatccgtcggtgctggaagtgctcaagccgatcatctacgagcagcgt
gaagtgaccgacgaggacatcatcaactggatgatgatcccgctgtgcctggaaaccgtg
cgttgcctggaagacggtattgtcgatactgccgccgaagcggacatgggcctggtctac
ggtatcggtttccctcccttccgtggtggtgcgctgcgttacatcgactcgatcggtgtg
gccgagttcgttgccctggctgaccagtacgccgatctgggcgcgttgtaccacccgacc
gcgaagctgcgtgaaatggccaagaccggccagcggttcttcggttaa
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