Pseudomonas fuscovaginae: NLK61_23115
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Entry
NLK61_23115 CDS
T10659
Name
(GenBank) transglycosylase SLT domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
pfuv Pseudomonas fuscovaginae
Brite
KEGG Orthology (KO) [BR:
pfuv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pfuv01011
]
NLK61_23115
Enzymes [BR:
pfuv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
NLK61_23115
Peptidoglycan biosynthesis and degradation proteins [BR:
pfuv01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
NLK61_23115
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LPAM_MltD
LysM3_LYK4_5
LysM_RLK
NMB0315_dom_I
LysM2_CERK1_LYK3_4_5
LysM_OapA
LysM2_NFP
SLT_2
PDZ_2
Motif
Other DBs
NCBI-ProteinID:
UUQ64105
LinkDB
All DBs
Position
complement(5085478..5086881)
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AA seq
467 aa
AA seq
DB search
MLSPNRKTINSGTLTRLAQAVAVAVSATLAGCQGLHHPSDNGTETASNLNVRIKQKPIWV
GEKTNPTPPQDVWERMRQGFKLQDGLGVNPRIEQQRLWFASNPSFLENASERGTLYIHYI
VERLEERNMPLELALLPVIESAYNPMAYSRADAVGLWQFIPSTGRNFNLRQDRFYDGRRD
ITASTIAALNYLTRLHDMFNGDWLLAMAAYNAGEGTVSRAIERNEKLGLPTDYWNLPLPQ
ETRDYVPKLLALSQVVMSPEAYGVNLNPIANEPYFASIEVNQPMDLSRVAALAEIDEDEM
IQLNPAYKQKATLDGPQHLLVPSSKAQLLTASLSNLKPEELVSLRPKKPVFESVASNGPV
RRYKVRNGDSLSSIAKANKVDIKELQRLNKLSGHKLKVGQTLVMQGNVRAPISKKSAAPT
TYKVQKGDSLYIVAKRFNVEMQHLKRLNPRTGQALKPGQILTVSQPH
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcacctaaccgaaaaaccatcaattcaggcacattgacgcgattggctcaggca
gtcgccgtggctgtgtccgccactctggcgggctgccaaggcttgcaccacccctcggac
aacggcaccgaaacggcgtcgaacctcaacgtccggatcaagcaaaagccgatctgggtc
ggcgaaaaaaccaacccgacgccgccacaggatgtctgggagcgcatgcgccagggcttc
aagctgcaggatggcctgggcgtcaacccacgcatcgagcagcaacgcctgtggttcgcc
agtaacccgtcgttcctcgaaaacgccagcgagcgcggcacactttatatccattacatc
gtcgaacgtctcgaagaacgcaacatgccgctggaactggcgctgttgccggtcatcgag
agtgcctacaacccgatggcctactcgcgtgcagatgcggtcggtctctggcagttcatt
ccctccaccgggcgcaacttcaacctgcgccaggaccgtttctacgatggacgccgcgat
atcaccgcctcgaccatcgcggcgctgaactacctgacccgcctgcacgacatgttcaat
ggcgactggctgctggccatggccgcctacaacgccggcgaaggtacggtcagccgggcg
atcgagcgtaacgagaagctcggcctgcccaccgactactggaacctgccgctgccccag
gaaacccgtgactacgtgcccaagctgctggccttgtcgcaggtggtgatgtccccggaa
gcctatggcgtgaacctcaacccgatcgccaacgaaccctacttcgccagtatcgaagtc
aaccagccgatggacctttcgcgggtcgcggccctggccgagatcgacgaagatgaaatg
atccagttgaacccggcctacaagcagaaagcgaccctcgacggtccgcagcacctgctg
gtaccgagttccaaggcacagttgctgaccgccagcctgtcgaacctcaagcctgaagaa
ctggtgagcctacggccgaaaaagccggtcttcgaaagcgttgccagcaacggtccggtc
cgccgttacaaggtcaggaacggcgacagcctgtcgtcgatcgccaaggccaacaaggtc
gatatcaaagaactgcaacgcttgaacaagctgtccgggcataagttgaaggtcggtcag
accctggtcatgcaggggaatgtccgtgcgccgatcagcaagaagtcggctgcccccacg
acctacaaggtgcagaaaggcgactccctttatattgtcgccaaacgtttcaatgtcgaa
atgcagcatctcaagcgcctcaatccgcgcaccggccaggcactcaagccaggtcagatc
ctcacagtttcccagccacactga
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