Pseudomonas fuscovaginae: NLK61_25015
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Entry
NLK61_25015 CDS
T10659
Name
(GenBank) polysaccharide lyase family protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
pfuv Pseudomonas fuscovaginae
Brite
KEGG Orthology (KO) [BR:
pfuv00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
NLK61_25015
Enzymes [BR:
pfuv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
NLK61_25015
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GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
OB_RNB
Motif
Other DBs
NCBI-ProteinID:
UUQ64435
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Position
complement(5499639..5501225)
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AA seq
528 aa
AA seq
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MRRLILIVCCSLAIHAHAAGFGFVRTDSRIVVDTEAHLLFSVDTHNGDLVSLRYRDNELQ
TTEPKASQIASGLGSAQVDARTVGDVIVISVRAGDLIHYYLAKKGRAAIYMATYAPTLLP
VGELRFVTRLNVSKLPKALRGTDSNVGTAIEGKDVFLLPDGRTSSKFYSAQPMIDDSLHG
VKGPGVAVYMLMGNRELSSGGAFFKDIATQKTATTHELYNYMYSNHTQTEPYRGGLHGIY
GLLFTDGDAPDATLTDLGFVARDLGLVGFVDNAGRGILAGHVSDVANELPAVVGLSNANA
EYWARADGNGRFVVTGIRPGQYRVTLYQNELEVAQTTATVSVGSTTQTSLQARPLAGQVK
WQIGLPDGTPAGFLNAHLLASAHPSDSRMTPWAPVTYTVGTSTPNTFPAAQWRDVNSPTR
IQFVLAANEVRDYRLRLFITLAQAGGRPAVSVNQHWEAPVPAASNQPDSRGITRGTYRGN
NSLFEISIPAAALHAGVNTLEIGVASGKTGQGFLSPGFVFDSVQWVQP
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgtctcattctgatcgtatgttgcagtcttgcgattcacgcacacgccgccggt
ttcggcttcgtacgcaccgactcccgaattgtcgtcgacaccgaggcacacctgctattc
agcgtggacacgcacaatggcgatctggtctccctgcgttatcgcgacaacgaattgcag
accaccgaacccaaagcctcgcagatcgcatccgggctgggcagcgcacaggtagacgcc
cgcacagtgggtgacgtgatcgtcatcagcgtacgggcgggtgatttgatccactactac
ctggccaaaaaaggtcgcgcggccatttacatggcgacctacgcccccaccctgctgccc
gtgggcgagttgcgcttcgtgacgcgactcaacgtcagcaagctgcccaaggctctgcgc
ggtaccgactccaacgtcggcacggcgatcgaaggcaaagacgtgttcctgctgccggat
ggacgcaccagttccaagttctattcggcacaaccgatgatcgacgactcgctgcacggt
gttaaaggccccggggtcgcggtgtatatgctgatgggtaatcgcgagctcagctcgggc
ggtgcatttttcaaggatattgccacccagaaaaccgcgaccacccatgaactctacaac
tacatgtactccaaccacacccagaccgagccctatcgcggcggcctgcacgggatttac
gggctgttgtttaccgacggtgatgcgcctgatgccaccttgaccgacctgggctttgtc
gccagggacctgggccttgtgggcttcgtggacaacgccgggcgcggcatactggcaggc
cacgtatccgacgtggcgaatgagctgccggcggtggtgggtttgagtaatgccaacgcc
gagtactgggcccgcgcagacggcaacgggcggttcgtcgtgaccgggattcgaccggga
caataccgggtcacgctgtatcagaatgagctggaagtcgcgcagaccacagccaccgtg
agcgtcggcagcacgacgcaaacgagcctgcaggcgcgaccgctggccggccaggtgaaa
tggcaaatcggtctgcccgacggcacgccggcaggttttctcaatgcccacctgctggcc
tccgcacaccccagcgattcgcgcatgacgccatgggcgccggtcacctacaccgttggc
accagcacgcccaacacgttccccgccgcgcagtggcgcgacgtcaacagccccacccgc
atccagttcgtcttggccgccaacgaggtgagggattaccgattgcgcctattcattacg
ctggcccaagccggagggcgcccagcagtgagcgtcaatcagcactgggaagcgcctgtg
cctgcggcctcgaaccagcccgacagccgtggtatcacccgaggcacttatcgcggtaac
aacagcctcttcgagatcagtattccggccgcagcgctgcatgccggtgtcaacacgctg
gagataggcgtggcatcgggtaaaacgggccaaggttttctgagccctggctttgtgttt
gatagcgtgcagtgggtgcaaccatga
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