Metapseudomonas furukawaii: KF707C_23510
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Entry
KF707C_23510 CDS
T07047
Name
(GenBank) cold-shock DEAD-box protein A
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pfuw
Metapseudomonas furukawaii
Pathway
pfuw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfuw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KF707C_23510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfuw03019
]
KF707C_23510
03009 Ribosome biogenesis [BR:
pfuw03009
]
KF707C_23510
Enzymes [BR:
pfuw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KF707C_23510
Messenger RNA biogenesis [BR:
pfuw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KF707C_23510
Ribosome biogenesis [BR:
pfuw03009
]
Prokaryotic type
rRNA helicases
KF707C_23510
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
HEM4
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
BAU74039
UniProt:
A0AAD1FFJ4
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All DBs
Position
2552402..2554078
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AA seq
558 aa
AA seq
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MTQEIGGFAALGIHPNVLAAISAVGYEEPSPIQSQSIPVILAGHDMIGQAQTGTGKTAAF
ALPILSRIDPAKREPQALILAPTRELALQVATAFETYAKQMPGLNVIAVYGGAPMGPQLK
ALRQGAQVIVATPGRLCDHLRRDERLLTTVQQLVLDEADEMLKLGFMEDLEVIFEALPES
RQSVLFSATLPPSIRSIAERHLKSPQHVKIAAKTQTVARIEQAHLMVHADQKTAAVLRLL
EVEEFDALIAFVRTKQATLDLASALEAKGYKAAALNGDIAQNQRERVIESLKDGRLDIVV
ATDVAARGIDVPRITHVFNVDMPYDPESYVHRIGRTGRAGRDGRALLLVTPRERRMLQVI
ERVTGQKVAEVRLPNAQQVLDARIKKLTASIAPLVAGAEAVYGDLLDRLVADIGCEPRAL
AAALLQKATNGQSLNLADVERETPLVPNSQPRERREREGGERSERGEYRERRAPMPLAEG
RVRCRTALGTRDGIAAKNLLGAILNEGGIAREAIGRIQIRETFSLIELPEEGLDRLLGKL
KDTRVAGKQLKLRRYRED
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgacccaggaaatcggcggattcgccgcgctcggcattcatcccaatgttctggccgcc
atctcggcggtcggctatgaagagccgtcccccatccaatcccagtcgattccggtgatc
ctcgccggccacgacatgattggccaggcccagaccggtaccggcaagactgcagccttc
gcgctgccgatcctgtcgcgcatcgatccggccaaacgtgagccgcaggcgctgatcctg
gcaccgacccgcgagctcgcactgcaagtcgctaccgctttcgaaacctacgccaagcag
atgcccggcctgaacgtgatcgccgtctacggcggcgcgcccatgggcccgcagctcaag
gccctgcgccagggcgcccaggtgatcgtggccactcccggccgcctgtgcgaccacctg
cgccgtgacgagaggctgctgaccaccgtgcagcagcttgtcctggacgaagcggacgag
atgctcaagctcggcttcatggaagacctcgaagtgattttcgaggccctgccggaaagc
cgccagagcgtgctgttctccgccaccctgccgccgtcgatccgttcgatcgccgagcgt
cacctgaagagcccgcagcacgtcaagatcgccgccaagacccagaccgtggcgcgcatc
gaacaggctcacctgatggtccacgccgaccagaagaccgccgccgtcctgcgcctgctg
gaagtcgaggaattcgacgccctgatcgccttcgtgcggaccaagcaggccacgctggac
ctggcgagtgccctggaagccaagggctacaaggccgctgcgctgaacggcgacatcgcc
cagaaccagcgcgagcgcgtgatcgagtccctgaaggacggtcgcctggacatcgtggtc
gccaccgacgtggccgcccggggtatcgacgtaccgcgcatcacccacgtgttcaacgtg
gacatgccctacgatccggaatcctatgtccaccgtatcggccgtaccggccgtgccggt
cgcgatggtcgcgcgctgctgctggtgaccccgcgcgagcgccgcatgctgcaggtgatc
gagcgtgtgaccggccagaaggtggccgaggtgcgcctgcccaacgcccagcaggtgctg
gatgcgcgcatcaagaagctcaccgccagcatcgccccgctggtggcgggtgcagaggcc
gtctatggcgacctgctggatcgcctggtggccgatatcggctgcgagccccgtgccctg
gccgccgccctgctgcagaaggccaccaatggccagtccctgaacctggccgacgtggag
cgcgagacaccgctggtgccgaactcgcagccccgcgagcgtcgcgagcgtgagggtggc
gagcgttccgagcgcggtgaataccgcgagcgccgcgcgcccatgcccctggctgaaggt
cgcgtgcgctgccgtaccgccctgggaacccgcgacggcatcgccgcgaagaacctgctg
ggcgccatcctcaatgagggcggtatcgcccgtgaggccatcggccgcatccagatccgc
gagaccttcagtctgatcgagctgccggaagagggcctcgaccgcctgctcggcaagctg
aaggacacccgcgtggccggcaagcagctcaagctgcgccgttaccgcgaggactga
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