Metapseudomonas furukawaii: KF707C_37090
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Entry
KF707C_37090 CDS
T07047
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pfuw
Metapseudomonas furukawaii
Brite
KEGG Orthology (KO) [BR:
pfuw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfuw03016
]
KF707C_37090
Enzymes [BR:
pfuw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
KF707C_37090
Transfer RNA biogenesis [BR:
pfuw03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
KF707C_37090
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
BAU75397
UniProt:
A0AAD1C3I9
LinkDB
All DBs
Position
complement(4042135..4043250)
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AA seq
371 aa
AA seq
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MAIDIIWIRDDAALARHCTEWRRLPFVALDTEFMRVDTFYPKAGLVQVGDGERAFVIDPL
LIGDWTPFAELLEDRAVLKVLHACSEDLEVFQRLTGALPQPLLDTQLAAGYLGIGYSMGY
SRLVQAVLGIELPKDETRSDWLQRPLTEMQVRYAAEDVQHLAELYVALESRLTEPKRAWV
LEDGAEMVANLRREVLPDELYREAKLGWKLTRNQLAVLRVLYAWRETEARLRDQPRNRIL
REHSLWPLARFQPDNLVSLARIDDMHPRTVRQDGNTLLNLIREAAATPPESWPEALPDPL
PPEAAPLLKQLRAIGQAEAERLGMAPELMLRKKHLEALLKSGFPNGPYSLPDGLRGWRRE
LMGQALLDALA
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
gtggccatcgacattatctggatccgcgacgacgccgcgctggctcgacactgcaccgaa
tggcggcgcctgcccttcgtagccctggacaccgagttcatgcgggtcgacaccttctac
cccaaggccggcctggtgcaggtgggggatggtgagcgtgccttcgtcatcgacccgctg
ctgatcggtgactggacgcccttcgccgagctgttggaggatcgtgccgtgctcaaggtc
ctgcacgcgtgcagcgaggacctggaagtcttccagcgcctgaccggcgcgctgccccag
ccgctgctggacacccagctggccgcaggctacctgggcatcggctactccatgggctat
tcgcgtctggtgcaggcagtgctcggcatcgagctgcccaaggacgagacccgttccgac
tggctgcagcgacccttgaccgagatgcaggtgcgttatgccgccgaggacgtgcagcac
ctggcggaactctatgtcgccctggagtcgcggctgaccgaaccgaaacgcgcctgggtg
ctggaagacggcgccgaaatggtcgccaacctgcgtcgtgaggtgctgccggacgagctc
taccgcgaggccaagctgggctggaaactcacccgtaaccaactggccgtgctgcgggtg
ctctacgcctggcgcgagaccgaggcccgcctgcgtgaccagccgcgcaaccgcatcctt
cgggagcacagcctgtggcccctggcgcgattccagccggacaacctggtgtccctggcg
cgaatcgacgacatgcacccccgcaccgtgcgccaggacggcaataccctgcttaacttg
atccgcgaggccgccgccacgccgccggagagctggcccgaggcgctgcccgatcccctg
ccgccggaggccgcgccgctgttgaagcagctccgtgccatcggccaggccgaagccgag
cgcctgggcatggcgcccgagctgatgctgcgcaagaagcacctggaagccctgctgaaa
agcggcttccccaacggcccctacagcctgcccgacggcctgcgtggctggcgccgcgag
ctgatgggccaggccctgctggacgccctggcctga
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