KEGG   Pseudomonas furukawaii: KF707C_43150
Entry
KF707C_43150      CDS       T07047                                 
Name
(GenBank) Lhr-like helicases
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pfuw  Pseudomonas furukawaii
Brite
KEGG Orthology (KO) [BR:pfuw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pfuw03400]
    KF707C_43150
Enzymes [BR:pfuw01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     KF707C_43150
    5.6.2.6  RNA 3'-5' helicase
     KF707C_43150
DNA repair and recombination proteins [BR:pfuw03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    KF707C_43150
SSDB
Motif
Pfam: DEAD_assoc DEAD Helicase_C ResIII Lhr_WH DUF5805 PhoH AAA_25
Other DBs
NCBI-ProteinID: BAU76003
LinkDB
Position
complement(4706245..4710618)
AA seq 1457 aa
MTQTRSPATLALEGFHPAVAAWFRGRFPAPTAAQARAWPSLRAGRSLLVAAPTGSGKTLT
AFLAALDALVREGLDGEGLPDRCSLVYVSPLKALSNDIRINLEEPLAGIRAELARQGLAD
VPIRTAVRTGDTPQAERDAMRRRPPHILVTTPESLYILLGSDSGRAMLSGCRSLIVDEIH
AIAGSKRGSHLMLSLERLEALCGRPLQRIGLSATQKPLERVAAFLMGRRETPCEVVDLGY
GRQRDLALEVPPVPLEAVLSHEAWDKVYDCLAQRVREHRTTLVFVNTRRLAERVARHLSE
RLGGAAVATHHGSLARELRLDAERRLKRGELKVLVATASLELGIDIGDVELVCQLGSPRS
IAAFLQRVGRSGHSVGGVPKGRLFPLSRDDLVECAALLDCVRRDELDALVIPHAPLDVLA
QQMVAEVACQAWDEDELFRVMTRAMPYGDLPRPQFDALVRMLSEGYAGRQGVRGAYLHRD
AVNRRLRGRRAARLTAITSGGAIPETADYTVLLEPQGMPVGSVHEDFAVESLAGDVFQLG
NQSYRILRVEPGRVRVEDARGQPPNIPFWLGEAPGRTDELSRGVARLRACVEGWLVAAEA
ADAVPGPSSDGSGERIERVVGRLCGELGLDEAAARQIVEYLARARASLGALPTRERLVME
RFFDESGGMQLIIHSPYGSRINRAWGLALRKRFCRSFNFELQAAATEDALILSLSTRHSF
PLEDVWRYLHSNSAEQVLIQALLDAPLFGVRWRWNASTALALPRFSGGRRVAPQIQRMRS
EDLLASVFPDQVACQENLVGEREIPDHPLVAQTLDDCLHEALDTEGWLALLRRMESGEVA
LLARDLPAPSALAAEILGARPYAFLDDAPLEERRTQAVQQRRWTDPESADDLGALDAGAI
ALVAGEAWPQVRDADEMHEALLALGGVTPAEAAANEGWPAWLAQLSRARRATCLSLDGEP
AFWVAAERLGLWRAVHPEAGARPAIGIPEGFEATWEPETARMELVRARLGGHGPLTLASL
AAWLRQPPPAVAMALAGLEREGQVLRGRFSPGAREDEWCERHLLARIHRYTVQRLRREIE
PVERADFMRFLFQWQRLAPGAQVRGAEALAGVLAQLEGFEAAAVAWESEILPSRVADYGI
NWLDDLCRAGRIVWCRLGTRGRAAGPVRGTPILLLPRKDLPLWRACLREAPAPEPSPRAE
RVRQVLASQGALFFDELMDEAHLLRSELEDCLGELVALGLANADSFAGLRSLLLPAARQG
RQGRRARLALAGMQDAGRWALLRGAPETGGRLPAEALEHVARTLLRRYGVVGWRLLEREA
GWLPPWRDLLRVYHRLEARGEIRGGRFVAGVSGEQFALPDAVGLLREVRRQPRDGSLVSL
SACDPLNLLGTLLAGTKVPAIMGNRLLFRDGVPVATLVAGKVALLQDADAATTQAWRAAL
IRQPAARPLRQGAHHSP
NT seq 4374 nt   +upstreamnt  +downstreamnt
atgacccagacccgctcgcccgccaccctggcgctggaggggttccatcccgccgtcgcc
gcctggttccgtggccgtttcccggcgcccacggcggcccaggcgcgcgcctggccttcc
ctgcgggccggccggagcctcctggtggcggcgcccaccggttccggcaagaccctgacc
gcctttctcgccgccctcgacgcgctggtccgtgaaggcctggacggggaggggctgccg
gaccgttgcagcctggtctatgtgtcgcccctcaaggcgctgtccaacgacatccgcatc
aacctggaagagcccctggcgggcatccgcgccgagctggcccgccagggccttgcggac
gtgcccatccgcaccgccgtgcgcaccggcgatacgccccaggccgagcgcgacgccatg
cgcaggcggccgccgcacatcctggtgaccaccccggaatccctctacatcctgctgggc
tccgattccggccgggccatgctgtcgggctgccgcagcctgatcgtcgacgagatccac
gccatcgccggcagcaagcgcggcagccacctgatgctgagcctggaacgcctggaggcc
ctctgtggccgcccgctgcaacgcatcggcctgtccgccacgcagaaacccctggagcgg
gtggcggcctttctcatggggcgacgggagacgccctgcgaagtggtggacctgggttac
ggccgccagcgcgacctggccctggaggtgccgccggtgcccctggaggcggtgctcagc
catgaggcctgggacaaggtctacgactgcctggcgcagcgggtgcgggagcaccgcacc
accctggtcttcgtcaacacccggcggctggcggagcgcgtcgcccggcacctctccgag
cgcctgggcggcgcggcggtggcgacccatcacggcagcctggcgcgggagctgcgcctg
gacgccgagcggcgcctgaagcgcggcgagctgaaggtgctggtggccaccgcgtccctg
gagctgggcatcgatatcggcgacgtggagctggtctgccaactgggctcgccgcgcagc
atcgcggccttcctgcagcgggtggggcgctccggccacagcgtcggcggcgtgcccaag
ggccggctgttccccctgtcgcgggacgacctggtggagtgcgcggcgctgctggattgc
gtacgccgcgacgaactggacgccctggtgattccccatgcgcccctggatgtgctggcg
caacagatggtggcggaagtggcgtgccaggcgtgggacgaggacgagctgttccgcgtg
atgacccgcgccatgccctatggcgacctgccgcgcccgcagttcgacgccctggtgcgg
atgctctcggagggctacgccggccgccagggcgtgcgcggcgcctacctgcaccgggac
gcggtgaaccggcgcctgcgaggccggcgcgcggcgcggctgaccgccatcacctccggc
ggcgccattcccgagacggccgactacaccgtgctgctggaaccccagggcatgccggtg
ggcagcgtccacgaggacttcgccgtggaaagcctggcgggcgatgtgttccagctgggc
aaccagtcctaccgcatcctgcgggtggagccgggccgggtgcgggtggaggatgcccgg
ggccagccaccgaacatccccttctggctgggcgaggcgccgggacgcaccgatgaactg
tcccggggcgtggcgcgattgcgggcctgcgtcgagggctggctggtggccgccgaggcg
gctgatgccgtgcccggcccgtcctccgacggaagcggggagcgcatcgagcgggtcgtc
gggcgcctgtgcggcgaactgggtctcgacgaggcggcggcgcggcagatcgtcgagtac
ctggcccgggcccgcgcctccctcggggcgctgccaacccgtgagcggctggtgatggag
cgcttcttcgacgagtccggcggcatgcagctgatcatccattccccctacggcagccgc
atcaatcgggcctggggcctggcgctgcgcaagcgtttctgtcgcagcttcaatttcgaa
ctgcaggcggcggccaccgaggacgcgctgatcctgtcgctatccacccgccacagcttt
cccctggaggatgtctggcgctacctgcattccaacagcgccgagcaggtgctgatccag
gccttgctggacgcgccgctgttcggcgtgcgctggcgctggaacgcctccacggccctg
gccctgccgcgcttcagcggcggccgcagggtggcgccgcagatccagcggatgcgcagc
gaggacctgctggccagcgtcttccccgaccaggtggcctgccaggagaacctggtgggc
gagcgggagattcccgatcacccgctggtggcccagaccctggacgactgcctgcatgag
gccctggacacggaaggctggctggccttgctgcggcgcatggagagcggcgaggtggcg
ctgctggcccgcgacctgccggcgccctcggccctggcggcggagatcctcggtgcgcgg
ccctacgccttcctcgacgacgcgcccctggaggaacgtcgaacccaggccgtgcagcag
cggcgctggaccgacccggagtccgccgatgacctgggcgcgctggacgccggggccatc
gcgctggtggccggggaggcctggccccaggtgcgggatgccgacgagatgcatgaggcg
ctgctggccctggggggcgtcaccccggccgaggcggcggccaacgaaggctggccggcc
tggctggcgcagctgtctcgcgcccgccgtgccacctgcctgtcactggatggcgaaccg
gcattctgggtggcggccgagcgcctggggctttggcgcgcggttcatcccgaggccggc
gccaggccggccatcggcattccggagggattcgaggcgacctgggaaccggaaaccgcc
cggatggaactggtgcgggcgcgcctgggcgggcatgggccgttgaccctggcgagcctg
gcggcctggttgcgccagccgccccccgccgtggcgatggccctggccggcctggagcgc
gaggggcaggtgctgcgggggcgcttcagccccggcgcccgggaggacgagtggtgcgag
cggcacctgctggcacgcatccatcgctacaccgtgcagcgcctgaggcgtgagatcgag
ccggtggagcgggccgacttcatgcgtttcctcttccagtggcaacggctcgcgccgggc
gcccaggtgcgcggtgccgaggccctggccggcgtgctggcgcaactggaaggcttcgag
gcggcggccgtcgcctgggaaagcgagatcctgcccagccgggtggccgactacgggatc
aactggctggacgacctgtgccgcgccggccgcatcgtctggtgtcgcctggggactcgg
ggcagggcggcgggaccggtgcgcggcacgcccatcctgttgctgccgcgcaaggacctg
cccctgtggcgagcctgcctgcgcgaggcgcctgcgccggagccctcgccccgggcggag
cgggtgcgccaggtgctggccagccagggggcgctgttcttcgacgagttgatggacgag
gcgcacctgttgcgcagcgagctggaggattgtctgggcgagctggtggcgctcgggctg
gccaacgccgacagcttcgccggcctgcgttccctgctgttgccggccgcgcgacagggt
cgccaggggcgtcgcgcccgcctggccctggccggcatgcaggacgccggacgctgggcc
ctgctgcggggggcgcccgagaccggcgggcggctgccggcggaggccctggaacatgtc
gccaggaccctgctgcgacggtacggcgtggtgggctggcgcctgctggagcgggaagcc
ggctggctgcccccctggcgcgacctgctgcgggtctaccaccggctggaggcacgcggc
gagattcgcggcggccggttcgtcgcgggggtatccggcgagcagttcgctctgcccgac
gccgtgggtctgttgcgggaggtgcgcaggcagccccgcgacggcagcctggtcagtctg
tcggcctgtgacccgctgaacctgttggggaccttgctggccggcaccaaggtccccgcg
atcatgggcaatcgcctgctgttccgcgatggcgttccggtggcgaccctggtggcgggc
aaggtggccctgttgcaggacgccgacgcggccaccacccaggcctggcgcgcggcgctg
atccgccagccggccgcgaggcccttgagacagggggcgcaccattcgccatag

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