Metapseudomonas furukawaii: KF707C_5480
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Entry
KF707C_5480 CDS
T07047
Name
(GenBank) DNA-directed RNA polymerase beta subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
pfuw
Metapseudomonas furukawaii
Pathway
pfuw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pfuw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KF707C_5480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfuw03021
]
KF707C_5480
03400 DNA repair and recombination proteins [BR:
pfuw03400
]
KF707C_5480
Enzymes [BR:
pfuw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KF707C_5480
Transcription machinery [BR:
pfuw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KF707C_5480
DNA repair and recombination proteins [BR:
pfuw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KF707C_5480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF3150
ApbA_C
Motif
Other DBs
NCBI-ProteinID:
BAU72236
UniProt:
A0AAD1FDL3
LinkDB
All DBs
Position
613376..617575
Genome browser
AA seq
1399 aa
AA seq
DB search
MKDLLNLLKNQGQIEEFDAIRIGLASPEMIRSWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVALAKVRRERMGHIELASPVAHIWFLKSL
PSRIGLLLDMTLRDIERVLYFESYVVIDPGMTTLEKGQLLNDEQYFEALEEFGDDFDARM
GAEAVRELLNAIDLDHEIGRLREEIPQTNSETKIKKLSKRLKLMEAFKDSGNHPEWMVLT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPT
LRLHQCGLPKKMALELFKPFIFGKLEARGMATTIKAAKKMVERELPEVWDVLAEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA
RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTREAVNAKGEGRVFADLQEVDRVFRAG
EASLHARVKVRINETVKDKDGSITKNTRIVDTTVGRALLFQVVPAGLSFDVVNQPMKKKA
ISKLINQCYRVVGLKDTVIFADQLMYTGFAYSTISGVSIGVNDFVIPDEKARIIDAATEE
VKEIESQYASGLVTQGEKYNKVIDLWSKANDEVSKAMMSNLSKEKVIDREGKEVDQESFN
SMYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVVTEVDCGTEHGLLMTPHIEGGDVVEPLGERVL
GRVIARDVFKPGSDEVIVPAGTLVDEQWVEFIERMSVDEVIVRSPISCETRYGICAKCYG
RDLARGHQVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRTSAADNVQVKNGGTIRL
HNLKHVERLDGALVAVSRSGELAVADEFGRERERYKLPYGAVISVKEGDKVDPGAIVAKW
DPHTHPIVTEMKGTVTFVGMEEGITIKRQTDELTGLTNIEVLDPKDRPAAGKDIRPAVKL
VDANGKELLLPGTDVPAQYFLPANALVGVADGAQVGVGDVIARIPQETSKTRDITGGLPR
VADLFEARRPKEPSILAEISGTISFGKETKGKRRLVITPNDGTDPYEELIPKWRHLNVFE
GEQVNRGEVISDGPSNPHDILRLLGVSALAKYIVNEIQDVYRLQGVKINDKHIETILRQM
LRKVEIAESGDSSFIKGDQMELTQVLEENERLASEDRFIAKYERVLLGITKASLSTESFI
SAASFQETTRVLTEAAVTGKRDYLRGLKENVVVGRLIPAGTGLAYHSERKRQRDAGKPVR
VSASEVEAALTEALNSSSN
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagacttgctgaatctgttgaaaaaccagggtcaaatcgaagagttcgatgccatc
cgtattggtctggcctcgcctgagatgatccgttcctggtccttcggtgaagtgaaaaag
ccggagaccatcaactaccgtaccttcaagccggagcgcgatggcctgttctgcgccaag
attttcggcccagttaaggactacgagtgcctgtgcggtaagtacaagcgcctgaaacat
cgtggtgtgatctgcgagaagtgcggcgtggaagtcgccctggccaaggtgcgccgcgag
cgcatgggtcacatcgaactggcttcccccgttgcccacatctggttcctgaagtcgctg
ccgtcccgcatcggcctcctgctggacatgaccctgcgtgacatcgagcgcgtactctac
ttcgagagctacgtcgtgatcgacccgggtatgaccaccctggagaaaggccagctgctg
aatgacgagcagtacttcgaggccctggaggagttcggtgacgacttcgacgcccgcatg
ggtgccgaggctgtccgtgagctgctgaacgccatcgatctggatcacgaaattggccgc
ctgcgcgaagaaattccgcagaccaactcggaaaccaagatcaagaagctgtccaagcgc
ctgaagctgatggaagccttcaaggattccggtaaccatcccgagtggatggtcctgacc
gtcctgccggtactgccgccggacctgcgtccgctggttccgctggatggtggtcgcttc
gcgacttccgaccttaacgacctgtatcgtcgggtgatcaaccgtaacaaccgcctgaag
cgcctgctcgacctggctgcgccggacatcatcgtgcgcaacgaaaagcgcatgctgcag
gaagctgtcgacgccttgctggacaacggtcgtcgtggtcgtgccatcaccggctcgaac
aagcgcccgctgaagtccctggccgacatgatcaagggtaagcaaggtcgcttccgtcag
aacctgctcggtaagcgcgtggactactccggtcgttccgtgatcaccgtgggtccgacc
ctgcgcctgcaccagtgcggtctgcccaagaagatggccctcgagctgttcaagccgttc
atcttcggcaagctggaagcccgcggcatggctaccaccatcaaggcggccaaaaagatg
gtcgagcgcgaactgcccgaggtctgggacgttctcgctgaagtcatccgcgaacacccc
gttttgctgaaccgcgcgccgacccttcaccgtctgggtatccaggcgttcgagccggtg
ctgatcgaaggcaaggccatccagttgcacccgctggtgtgcgcggcgtacaacgccgac
ttcgacggtgaccagatggccgtccacgttccgctgaccctcgaggcccagctggaagcg
cgtgcgctgatgatgtccaccaacaacatcctgtcgcccgccaacggcgagccgatcatc
gtcccgtctcaggacgtggtactgggtctgtactacatgactcgtgaggctgtgaacgcc
aagggcgagggtcgcgtattcgctgacctgcaggaagtcgaccgcgtgttccgcgccggc
gaagcgtccctgcacgcccgcgtgaaagtgcgcatcaacgagaccgtgaaggacaaggac
ggctccatcaccaagaacacccgcatcgtcgacaccaccgtcggccgcgcgctgctgttc
caggtggttccggccggcctgtcgttcgacgtggtcaaccagccgatgaagaaaaaggcg
atctccaagctgatcaaccagtgctatcgcgtggtcggtctgaaggacaccgtcatcttc
gccgaccaactgatgtacaccggtttcgcctactccaccatttccggcgtctccatcggc
gtgaacgacttcgtcatccccgacgagaaggcccgcatcattgatgccgccaccgaggaa
gtgaaggagatcgagtcccagtacgcctccggcctggtaacccagggtgagaagtacaac
aaggtgatcgacctctggtccaaggccaacgacgaagtttccaaggcgatgatgagcaac
ctctcgaaagagaaggtcatcgaccgcgaaggcaaggaagtcgaccaggagtccttcaac
tccatgtacatgatggcggactccggtgcgcggggttccgcggcccagatccgtcagctg
gccggtatgcgtggcttgatggcgaagccggacggctccatcatcgagacccccatcacc
gcgaacttccgtgaaggcctgaacgtactccagtacttcatctccactcacggtgctcgt
aaaggtctggcggataccgcactgaagaccgcgaactccggttacctgactcgtcgtctc
gtcgacgtggcccaggacctggtagtgaccgaagtcgactgcggtaccgagcacggcctg
ctgatgacaccgcacatcgaaggcggcgacgtggtcgagcccttgggtgagcgcgtactg
ggccgtgtcattgcccgcgacgtgttcaagccgggttccgacgaagtcatcgttccggcc
ggtaccctggtcgacgagcagtgggtcgagttcatcgagcgcatgagcgtcgacgaagtg
atcgtgcgttcgcctatcagctgcgaaacccgctacggcatctgcgccaagtgctacggt
cgcgacctggcacgtggacaccaggtgaacatcggtgaagcggttggcgttatcgccgcc
cagtccatcggtgagccgggtacccagctgaccatgcgtaccttccacatcggtggtgcg
gctagccggacttccgctgccgacaatgtccaggtgaaaaacggcggcaccatccgcctg
cacaacctgaagcacgtggagcgcctcgacggtgcgctggtggcggtatcccgctccggt
gagcttgccgttgccgacgagttcggtcgcgagcgcgagcgctacaagctgccttacggt
gccgtgatctccgtgaaagagggcgacaaggtcgacccgggcgccatcgtcgccaagtgg
gacccgcacacccacccgatcgtgaccgaaatgaagggtaccgttaccttcgtcggcatg
gaggagggcatcaccatcaagcgtcagaccgacgagcttaccggtctgaccaacatcgag
gttctggatccgaaggatcgtccggctgccggcaaggacattcgtccggccgtgaaactg
gtggacgccaacggcaaggagctgctgctgccgggtaccgacgtgccggcccagtacttc
ctgccggccaacgccctggtgggtgtggctgacggtgctcaggtgggcgtgggtgatgtt
atcgcccgtatcccgcaggaaacctcgaagacccgtgacatcaccggtggtctgccgcgc
gttgccgacctgttcgaagcgcgtcgtccgaaggagccgtctatcctggcggaaatcagc
ggcaccatttccttcggcaaggaaaccaagggcaagcgccgtctggtcatcacgccgaac
gatggtaccgatccttacgaggagctgattccgaagtggcgtcacctgaacgtgttcgaa
ggcgagcaggtgaatcgcggtgaggtgatctccgacggcccgagcaacccgcacgatatc
ctgcgactgctcggcgtcagcgcactggccaagtacatcgtcaacgagattcaggatgtg
taccgactgcagggtgtgaagatcaacgacaagcatatcgagaccatcctgcgtcagatg
ctgcgcaaggtcgaaatcgctgagtcgggtgattccagtttcatcaagggcgaccagatg
gagctgacccaggtgctggaggagaacgaacgtctggcgagcgaagaccgcttcatcgcc
aagtacgagcgtgtcctgctgggcatcaccaaggcctcgctgtcgaccgagtccttcatc
tccgcagcgtccttccaggaaaccactcgcgttctcaccgaggcggcggttaccggcaag
cgcgactacctgcgcggactgaaggaaaacgtggtggtgggtcgcctgattccggccggt
accggcctggcgtaccacagcgaacgcaagcgtcagcgcgatgccggcaagccggtccgc
gttagcgcgagcgaggtggaagcggcgctgaccgaagcgctgaactccagcagcaactaa
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integrated database retrieval system
