Metapseudomonas furukawaii: KF707C_7810
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Entry
KF707C_7810 CDS
T07047
Name
(GenBank) ATP-dependent RNA helicase PA3950
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
pfuw
Metapseudomonas furukawaii
Pathway
pfuw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfuw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KF707C_7810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfuw03019
]
KF707C_7810
Enzymes [BR:
pfuw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KF707C_7810
Messenger RNA biogenesis [BR:
pfuw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KF707C_7810
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
CMS1
Motif
Other DBs
NCBI-ProteinID:
BAU72469
UniProt:
A0AAD1BVD9
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All DBs
Position
849441..850760
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AA seq
439 aa
AA seq
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MTFASLGLIEPLLRATEALGYQTPSPVQAEAIPAVLKGRDLMAAAQTGTGKTAGFALPLL
QKLTQEGPQVAANSIRALVLVPTRELAEQVNESFRVYGQHLPLRHYAVYGGVSINPQMMK
LRKGIDILVATPGRLLDLYRQNAVKFGQLQALVLDEADRMLDLGFSRELDELFVALPRRR
QTLLFSATFSDAIRQMARELLRDPLSIEVSPRNAAARSVSQWLIPVDKKRKSELFLHLLE
DRGWGQVLVFAKTRKGVDQLVDELQARGLAADSIHGDKPQPSRLRALQRFKAGEVQVLVA
TDVAARGLDIDDLPLVVNFDLPIVAEDYVHRIGRTGRAGATGEAVSLVCADEVQLLSAIE
VLTRQTLQRRDEPGFVPDHRVPQTDATGAILKKPKKPKKPKESQPASGKGASLGRWIDSE
KPKVKAVRKAPGFGKAKKG
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgaccttcgcctccctcggcctgatcgaacccctgctgcgcgccaccgaggccctcggc
taccagaccccttccccggtgcaggccgaggccatacccgccgtgctcaagggccgcgac
ctgatggccgccgcccagaccggcaccggcaagaccgccggcttcgccctgccgttgttg
cagaagctcacccaggaaggcccccaggtcgccgccaactccatccgcgccctggtgctg
gtgcccacccgcgagctggccgagcaggtcaacgagagcttccgggtctacggccagcat
ctgcccctgcgccactacgccgtctacggcggggtcagcatcaacccgcagatgatgaag
ctgcgcaagggcatcgacatcctcgtcgccaccccgggccgcctgctggacctctaccgg
cagaacgcggtgaagttcggccagctccaggcactggtgctggacgaggccgaccgcatg
ctcgacctcggcttctcccgcgagctggatgagctcttcgtcgccctgccgcgccggcgc
cagaccctgctgttctccgccaccttctccgacgccattcgccagatggcccgcgagctt
ctgcgcgacccgctgtccatcgaggtcagtccgcgcaacgcggcggccaggagcgtgagc
cagtggctgatcccggtggacaagaagcgcaagtccgagctcttcctgcacctgctggaa
gaccgtggctggggccaggtgctggtcttcgccaagacccgcaagggcgtcgaccaactg
gtggacgaactgcaggcccgaggcctggccgccgactcgatccacggcgacaagccgcag
ccttcgcgcctgcgcgccctgcaacgcttcaaggccggcgaggtgcaggtgctggtcgcc
accgacgtggccgcccgtggcctggacatcgacgacctgcccctggtggtcaacttcgac
ctgcccatagtcgccgaggactacgtgcaccgcatcggccgtaccggccgcgccggtgcc
acgggggaggcggtgtccctggtctgcgccgacgaggtccagttgctttccgccatcgag
gtgctgacccgccagaccctgcagcgccgcgatgagcccggcttcgtcccggatcaccgg
gtgccgcagaccgatgccaccggcgccatcctgaagaagccgaagaaacccaagaagccc
aaggagtcccagccggcctccggcaagggggcgtccctggggcgctggatcgacagcgag
aagcccaaggtgaaggcggtgcgcaaggcaccgggtttcggcaaggcgaagaagggctga
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