Metapseudomonas furukawaii: KF707C_8330
Help
Entry
KF707C_8330 CDS
T07047
Name
(GenBank) protein RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
pfuw
Metapseudomonas furukawaii
Brite
KEGG Orthology (KO) [BR:
pfuw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfuw03016
]
KF707C_8330
Enzymes [BR:
pfuw01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
KF707C_8330
Transfer RNA biogenesis [BR:
pfuw03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
KF707C_8330
Prokaryotic type
tRNA splicing ligases
KF707C_8330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
BAU72521
UniProt:
A0AAD1FDW3
LinkDB
All DBs
Position
complement(908859..910079)
Genome browser
AA seq
406 aa
AA seq
DB search
MNVNGPQLLEVASGKPIKLWTQGVPVEDEARQQLINTAKMPFIFKHLAVMPDVHLGKGST
IGSVIPTLGAIIPAAVGVDIGCGMMAALTSLHARDLPDNLHGLRSAIERAVPHGKTFGRR
DQGAWDAVPDAADQAWRPLAGRFKAITRKYPRLEKTNNRSHLGTLGTGNHFIEVCLDEAD
RVWFMLHSGSRGVGNAIGTLFIELAQADMRQHIANLPDRDLAYLEEGSRHYDDYVEAVGW
AQDFARQNRALMMQAVIEAARKVIRKPFEASLEAVNCHHNYVQKERHFGREVLVTRKGAV
SARKGELGIIPGSMGARSFIVRGLGNEESFCSCSHGAGRTMSRSRAKKLFSVEDQVRATA
HVECRKDKDVIDEIPMAYKDIDAVMAAQRDLVEVVHTLRQVVCVKG
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgaacggtccacaactgctggaagtggccagcggcaagcccatcaaactctgg
acccagggcgtcccggtagaggacgaagcgcgccagcaattgatcaacaccgcgaagatg
cccttcatcttcaagcacctcgccgtgatgcccgacgtccacctgggcaagggctccacc
atcggcagcgtgatccccaccctgggcgccatcattcccgccgcggtgggcgtggacatc
ggctgcggcatgatggccgccctcacctccctgcatgcccgcgacctgccggacaacctc
cacggcctgcgcagcgccatcgagcgcgcggtgccccacggcaagaccttcggtcgacgc
gaccagggcgcctgggacgcggtgccggacgcggccgaccaggcctggcgccccctcgcc
gggcgcttcaaggccatcacccgcaagtacccgcgcctggagaagaccaacaaccgcagc
cacctgggcaccctggggaccggcaaccacttcatcgaggtctgcctcgacgaggccgac
cgggtctggttcatgctccacagcggctcccggggcgtgggcaacgccatcggcaccctg
ttcatcgagctggcccaggcggacatgcgccagcacatcgccaacctgccggaccgcgat
ctcgcctacctcgaggaaggcagccgccattacgacgactacgtcgaggccgtgggctgg
gcccaggacttcgcccggcagaaccgcgccctgatgatgcaggcggtgatcgaggcggcg
cgcaaggtgatccgcaaacccttcgaggccagcctggaagcggtcaactgtcaccacaac
tacgttcagaaggaacgccacttcggccgcgaagtgctggtcacccgcaagggcgcggtt
tccgcgcgcaagggcgagctgggcatcatcccgggctccatgggcgccaggagcttcatc
gtccgcggcctcggcaacgaggagtccttctgctcctgcagccacggcgccggccgcacc
atgagtcgcagccgggcgaagaagctgttcagcgtcgaggaccaggtccgcgccaccgcc
cacgtggagtgccgcaaggacaaggatgtgatcgacgagatccccatggcctacaaggac
atcgacgccgtgatggccgcccagcgcgacctggtggaagtggtgcacaccctgcgccag
gtggtctgcgtcaagggctga
DBGET
integrated database retrieval system
