Pseudomonas fulva: Psefu_0119
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Entry
Psefu_0119 CDS
T01501
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pfv
Pseudomonas fulva
Pathway
pfv03420
Nucleotide excision repair
pfv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pfv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Psefu_0119
03430 Mismatch repair
Psefu_0119
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfv03400
]
Psefu_0119
Enzymes [BR:
pfv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Psefu_0119
DNA repair and recombination proteins [BR:
pfv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Psefu_0119
MMR (mismatch excision repair)
Other MMR factors
Psefu_0119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
Ran-binding
Motif
Other DBs
NCBI-ProteinID:
AEF20106
UniProt:
F6ADG5
LinkDB
All DBs
Position
complement(130437..132638)
Genome browser
AA seq
733 aa
AA seq
DB search
MQNDLDQRLKSLNEAQYHAVTTPPGHQLVLAGAGSGKTRVLVHRIAFLIQRLDVSPHSIL
SVTFTNKAAAEMRHRIEDVLGQSPAGMWVGTFHGLAHRLLRAHWQEAGLAENFQILDSDD
QQRLIKRVIRELGLDEQRWPAKQAQWFINGQKDEGIRPAGIQASGDLFLATMRSIYEAYE
AACARAGVIDFAELLLRALDLWRNNAGLLAHYQKRFRHILVDEFQDTNAVQYAWLRFLAM
GGESLMVVGDDDQSIYGWRGAKIENIQQFDSDFADAEIIRLEQNYRSTANILNAANALIA
NNQGRLGKELRTDVGDGELISLYAAFNEHDEARYVVETIEDALHKDGLKRSDIAILYRSN
AQSRVLEEALLREKIPYRIYGGQRFFERAEIKNAMAYLRLIHQRGNDAALERVINVPARG
IGEKTVETLRQFARANDLSMWAALHEAVGTKVIGGRAASALNAFVELIDTLALKVEGLQL
HSTAQLVIEQSGLLAYHRDEKGEKAQARVENLEELVSAARAFDSYEGEEGDDAQTPLAAF
LDHASLEAGDTQAAEHEDSVQMMTLHSAKGLEFPRVFLVGMEEGLFPHKMSLEEPGRLEE
ERRLAYVGITRAMRNLVISYAETRRLYGNETYNKVSRFVREVPPHLVQEVRLSNSVSRPY
GSGSRSMSGSSLFAGSAVPDTPFNLGQRVQHSLFGEGTILNFEGSGPQARVQVNFESEGS
KWLMLAYAKLEAI
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatgacctcgatcagcgactcaaatctctcaacgaagcccagtaccacgcggtc
accacgccgcccggtcatcaactggtgctggccggtgccggttccggcaagacccgcgtg
ctggtgcaccgcatcgcctttctgatccagcgcctggacgtctcgccgcacagcatcctg
tcggtgaccttcaccaacaaggcggcggccgagatgcgtcatcgcatcgaggatgtgctc
gggcaaagcccggcggggatgtgggtcggcaccttccacggcctggcgcaccgcctgctg
cgcgcgcactggcaggaggccgggctggccgagaacttccagattctcgattccgacgac
cagcaacggctgatcaagcgggtgatccgcgagctgggcctggatgagcagcgctggccg
gccaagcaggcgcagtggttcatcaacggccagaaggacgaaggcattcgcccggccggt
atccaggccagtggcgatctgttcctggccaccatgcgcagcatctacgaagcctacgag
gcggcctgcgcccgagccggggtgatcgacttcgccgagctgctgctgcgcgccctcgac
ctgtggcgcaacaacgccggcctgctggcgcattaccagaagcgcttccggcacatcctg
gtcgacgaattccaggacaccaacgccgtgcagtacgcctggctgcgctttctcgccatg
ggcggcgaaagcctgatggtggtgggcgacgacgaccagtcgatctacggctggcgcggc
gcgaagatcgagaacatccagcagttcgacagcgacttcgccgacgcggagatcatccgc
ctggagcagaactaccgttccacggcgaacatcctcaacgctgccaacgcactgatcgcc
aacaaccaggggcgcctgggcaaggagctgcgcaccgatgtcggcgatggcgagctgatc
agcctgtacgccgccttcaacgaacacgacgaagcgcgctacgtggtcgaaaccatcgag
gacgccctgcacaaggacggcctcaagcgcagcgacatcgccattctctaccgctccaac
gcccagtcgcgggtgctggaggaagccctgctgcgcgagaagattccttaccgcatctac
ggcggccagcgcttcttcgagcgcgcggaaatcaagaacgccatggcctacctgcgcctg
atccaccagcgcggcaacgacgcggcgctggagcgggtgatcaacgtgccggcccgcggt
atcggcgagaagacggtggaaaccctgcgccagttcgcccgcgccaacgacctgtcgatg
tgggccgcgctgcacgaagcggtcggcaccaaggttatcggtggccgtgctgccagcgcg
ctgaacgccttcgtcgaactgatcgacaccctggccctgaaggtcgagggcctgcaattg
cacagcaccgcgcaactggtgatcgaacaatccggcttgctcgcctatcaccgcgacgag
aagggcgagaaggcccaggctcgcgtggaaaacctcgaggaactggtgtccgccgcccgt
gccttcgactcttacgaaggcgaggaaggtgacgacgcgcaaacgccgctggcggccttc
ctcgatcacgcttcgctggaagccggcgacacccaggccgccgagcatgaagacagcgtg
cagatgatgaccctgcacagcgccaagggcctggagttcccgcgggtgttcctggtgggc
atggaagaaggcctgtttccccacaagatgagcctggaagaacccggccgcctggaagag
gaacgccgcctggcctacgtgggcatcacccgggccatgcgcaacctggtgatcagctac
gcggagacccgccgcctgtacggcaacgagacctacaacaaggtctcgcgcttcgtgcgc
gaagtgccgccacatctggtgcaggaagtacgcctgtccaacagcgtcagccgcccgtac
ggcagtggcagccgcagcatgagcggcagcagcctgttcgctggcagcgccgtgccggac
acgccgttcaacctcggccagcgtgtgcagcactcgctgttcggcgaaggcaccatcctc
aacttcgagggctcggggccccaggcgcgggtgcaggtgaacttcgaaagcgaaggcagc
aagtggctgatgctggcctatgccaagctcgaagctatctaa
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