Pseudomonas fulva: Psefu_0634
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Entry
Psefu_0634 CDS
T01501
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
pfv
Pseudomonas fulva
Pathway
pfv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pfv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Psefu_0634
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfv03021
]
Psefu_0634
03400 DNA repair and recombination proteins [BR:
pfv03400
]
Psefu_0634
Enzymes [BR:
pfv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Psefu_0634
Transcription machinery [BR:
pfv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Psefu_0634
DNA repair and recombination proteins [BR:
pfv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Psefu_0634
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
BSH_YknX
DUF3150
ApbA_C
Motif
Other DBs
NCBI-ProteinID:
AEF20612
UniProt:
F6AJA0
LinkDB
All DBs
Position
709108..713307
Genome browser
AA seq
1399 aa
AA seq
DB search
MKDLLNLLKNQGQVEEFDAIRIGLASPEMIRSWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVALAKVRRERMAHIELASPVAHIWFLKSL
PSRIGLLMDMTLRDIERVLYFESYVVIDPGMTTLEKGQLLNDEQYFEALEEFGDDFDARM
GAEAVRELLHAIDLEHEIGRLREEIPQTNSETKIKKLSKRLKLMEAFQGSGNLPEWMVLT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLSAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPA
LRLHQCGLPKKMALELFKPFIFGKLEMRGLATTIKAAKKMVERELPEVWDVLAEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA
RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTREAINAKGEGRVFADLQEVDRVFRAG
EASLHAKVKVRINETVKQKDGSLVKNTRIVDTTVGRALLFQVVPAGLSFDVVNQSMKKKA
ISRLINQCYRTVGLKDTVIFADQLMYTGFAYSTISGVSIGVNDFVIPDEKARIIDAATEE
VKEIESQYASGLVTQGEKYNKVIDLWSKANDEVSKAMMANLSKEKVIDREGNEVDQESFN
SMYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLSVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVVTEIDCGTDQGLHMTPHIEGGDVVEPLGERVL
GRVIARDVFKPGTEDVIVPAGTLVDEQWVEFIELNSIDEVVVRSPISCETRYGICAKCYG
RDLARGHQINIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRTSAADSVQVKNGGAIRL
HNLKHVERLDGNLIAVSRSGELAVADEFGRERERYKLPYGAVISVKEGDKVEAGAIVAKW
DPHTHPIVTEMKGTVTFVGMEEGITIKRQTDELTGLTNIEVLDPKDRPAAGKDIRPAIKM
VDANGKELLLPGTDVPAQYFLPANALVGVADGAQIAVGDVIARIPQETSKTRDITGGLPR
VADLFEARRPKEASILAEISGTISFGKETKGKRRLVITPTDGSDPYEELIPKWRHLNVFE
GEQVNKGEVISDGPSDPHDILRLLGVSALAKYIVNEIQDVYRLQGVKINDKHIETILRQM
LRKVEVSEAGDSSFIKGDQVELTQVLGENERLVEEDKFIAKYTRVLLGITKASLSTESFI
SAASFQETTRVLTEAAVTGKRDFLRGLKENVVVGRLIPAGTGLAYHSERKRKRDAEKPMR
VSASEVEAALTEALNSSEN
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagacctactgaatttgctgaaaaaccagggtcaagtcgaagagttcgatgccatt
cgcatcggtcttgcttcgcctgagatgatccgttcgtggtcgttcggtgaagttaaaaag
ccggaaaccatcaactaccgtacgttcaaacccgagcgtgacggcctgttctgcgccaag
atctttggcccggtcaaggattacgagtgcctgtgcggcaagtacaagcgcctcaagcac
cgtggtgtgatctgtgagaagtgcggcgtcgaagtcgccttggccaaggttcgtcgtgag
cgcatggcgcacatcgagctggcttctcccgttgcccacatctggttcctgaagtccctg
ccgagccgtatcggcctgctgatggacatgaccctgcgtgatatcgagcgcgtgctctac
ttcgagagctacgtggttatcgacccgggcatgaccaccctcgagaagggccagctgctc
aatgacgagcagtacttcgaagcgctggaagagttcggtgacgacttcgacgcccgcatg
ggtgccgaggccgttcgcgagctgctgcacgctatcgacctagagcacgagatcggccgc
ctgcgcgaagagattccgcagaccaactcggaaaccaagatcaagaagctgtccaagcgt
ctgaagttgatggaagccttccagggttccggcaacctgccagagtggatggtgctgacc
gttctgccggttctgccgccagatctgcgcccgctcgttccgctggacggtggccgtttc
gccacttccgacctgaacgacctgtatcgccgcgtcatcaaccgtaacaaccgtctcaag
cgcctgctcgatctgtccgcgccggacatcatcgtgcgcaacgaaaagcgcatgctgcag
gaagcggtcgacgccctgctcgacaacggtcgtcgcggtcgcgccatcaccggttcgaac
aaacgtcctctgaaatccctggccgacatgatcaagggtaagcagggccgtttccgtcag
aacctgctcggtaagcgcgttgactactccggtcgttccgttattaccgtgggcccggct
ctgcgcctgcaccagtgcggtctgccgaagaagatggctctggaactgttcaagccgttc
attttcggcaagctggaaatgcgtggtctggcgactaccatcaaggccgccaagaagatg
gtcgagcgcgagctgccggaagtgtgggatgttctcgccgaagtgattcgcgaacacccc
gtactgctcaaccgtgcaccgactctgcaccgtctgggtatccaggcgttcgagccagtc
ctgatcgaaggtaaagccatccagctgcacccgctggtttgtgcggcctacaacgccgac
ttcgacggtgaccagatggctgttcacgtgccgctgacgctggaagcccagctcgaagcg
cgcgcgctgatgatgtcgaccaacaacatcctgtcgcccgccaacggtgagccaatcatc
gtaccgtcgcaggacgtggtactgggtctgtactacatgacccgtgaagccatcaacgcc
aagggcgaaggtcgcgtgttcgccgacctgcaggaagtcgaccgcgtattccgcgctggc
gaagcctcgctgcacgccaaggtcaaggtgcgcatcaacgagaccgtcaagcagaaggac
ggcagcctggtcaagaacacccgcatcgtcgacaccactgtcggccgcgcgctgctgttc
caggttgtgccggccggcctgtcgttcgacgtggtcaaccagtcgatgaagaagaaggcg
atctcccgtctgatcaaccagtgctaccgcaccgtgggtctgaaggacactgtcatcttc
gccgaccagctgatgtacaccggtttcgcctactcgaccatctccggtgtgtcgatcggc
gtgaacgacttcgtcatcccggatgagaaggcgcgcatcatcgacgccgccaccgaggaa
gtgaaggaaatcgaatcgcagtacgcctctggcctggtaacccagggcgagaagtacaac
aaggtgatcgacctctggtcgaaggccaacgacgaagtctccaaggcgatgatggccaac
ctctcgaaagagaaggtcatcgaccgcgaaggtaacgaagtcgatcaggagtccttcaac
tccatgtacatgatggccgactccggtgcgcgtggttccgctgcgcagatccgtcagctg
gccggtatgcgtggtctgatggccaagccggacggctcgatcatcgagacgccgatcacc
gcgaacttccgtgaaggcctgtcggtactgcagtacttcatctccactcacggtgctcgt
aaaggtctggcggataccgcactgaagaccgcgaactccggttacctgactcgtcgtctg
gtcgatgtcgcccaggatctggtcgtgaccgagatcgactgcggcaccgaccagggcctg
cacatgactccgcacatcgaaggcggcgacgttgtagagccgctgggtgagcgcgtactg
ggccgtgtcatcgcccgtgacgtgttcaagccgggcaccgaggacgtcatcgttccggcc
ggtactctggtcgacgagcagtgggtcgagttcatcgagctgaacagcatcgacgaagtg
gtcgtgcgttcgccgatcagctgtgaaacccgctacggtatctgcgccaagtgctacggt
cgcgacctggctcgtggtcaccagatcaacatcggtgaagccgtcggcgttatcgcggcc
cagtcgatcggtgagccgggtacccagctgaccatgcgtacgttccacatcggtggtgcg
gcaagccgtacttcggctgccgacagcgtccaggtgaagaacggtggtgcgatccgtctg
cacaacctcaagcacgtcgagcgtctggacggcaacctgatcgcggtatcgcgctccggt
gagctggccgttgccgacgagttcggtcgcgagcgcgagcgctacaagctgccgtacggt
gcggtcatctccgtgaaggaaggtgacaaggtcgaagctggcgccatcgtcgccaagtgg
gacccgcacacccacccgatcgtgaccgaaatgaagggtaccgtgaccttcgtcggcatg
gaggagggcatcaccatcaagcgccagaccgacgaactgaccggtctgaccaacatcgag
gttctcgatccgaaggatcgtccagctgctggcaaggacattcgtccggccatcaagatg
gtcgacgccaacggcaaggaactgctgctgccgggtaccgacgttcccgcccagtacttc
ctgcctgccaacgccctggtcggcgtggcggatggtgcgcagatcgcggtcggtgacgtt
atcgctcgtatcccgcaggaaacctcgaagacccgtgacatcaccggtggtctgccacgc
gttgccgacctgttcgaagcccgtcgtcctaaagaagcttcgatcctggcggaaatcagc
ggcaccatctcgttcggtaaggagaccaagggcaagcgccgtctggtcatcacgccgacc
gatggcagcgatccgtacgaagagctgattccgaaatggcgtcaccttaacgtgtttgaa
ggtgagcaggtcaacaagggtgaagtcatttccgacggcccgagcgatccgcacgacatc
ctgcgtctgctgggcgtcagcgcgctggccaagtacatcgtcaacgagatccaggacgtt
taccgtctgcagggcgtgaagatcaacgacaagcacatcgagaccatcctgcgtcagatg
ctgcgtaaggtcgaagtctccgaagccggcgactccagcttcatcaagggtgaccaggtc
gagctgactcaggtactgggcgagaacgagcgcctggtcgaagaggacaagttcatcgcc
aagtacacccgcgtgctgctgggtatcaccaaggcgtcgctgtccaccgagtcgttcatc
tcggcggcatccttccaggaaaccactcgcgtcctcaccgaggcggcggttactggcaag
cgcgacttcctgcgtggcctgaaggagaacgtggtcgtgggtcgtctgatcccggcgggt
accggtctggcctatcacagcgagcgcaagcgcaagcgtgatgccgagaagccgatgcgc
gtcagcgccagtgaagtggaagcagcgctgaccgaagcgctgaactccagcgaaaattga
DBGET
integrated database retrieval system
