Pseudomonas fulva: Psefu_1137
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Entry
Psefu_1137 CDS
T01501
Name
(GenBank) nuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pfv
Pseudomonas fulva
Brite
KEGG Orthology (KO) [BR:
pfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfv03400
]
Psefu_1137
DNA repair and recombination proteins [BR:
pfv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Psefu_1137
Archaeal homologous recombinant proteins
Psefu_1137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AEF21114
UniProt:
F6AC34
LinkDB
All DBs
Position
1239338..1240555
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AA seq
405 aa
AA seq
DB search
MRLLHTSDWHLGQHFMGKTRQAEHQAFCAWLIEQVREHGVQAVLIAGDIFDTGSPPSYAR
EQYNHFVVALRETGCQLVVLGGNHDSVAMLGESRTLLAQLGTRVIPGVGAHLHEQLLVLA
GADGQPAALLCAIPFIRPRDVLRSEAGQSAADKQLSLQQAIHAHYQALYELALARRSELG
AALPIIATGHLTTVGASASESVREIYVGALEAFPTSSFPAVDYIALGHIHRPQKVGGLEH
IRYSGSPIPLSFDEARQQKEVLLVDLDTSGLREVRALPVPRYQALQSVRGSLKTLPAVIA
EAAREGSEERPVWLEVQVEMDDYLSDLQVRIAALCEGLPVEVLRIRRARGTAVASLQGEQ
GMLDELTPEQVFDQRLASETLEPEQTQRLHELHDQVLAELRDESA
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgcgccttctgcacacctccgactggcacctgggccagcacttcatgggcaagacgcgc
caagccgaacaccaggccttttgcgcctggctgatcgagcaggtgcgtgagcatggggtt
caggcggtgctgatagcaggcgacatcttcgacaccggctcgccgcccagctacgcccgc
gagcagtacaaccacttcgtggtggcgctgcgcgaaaccggctgccagttggtggtgctc
ggcggtaaccatgattcggtggcgatgctcggcgagagccgcaccttgctggcgcagctc
ggcacgcgagtaattcccggtgttggcgcgcacctgcatgagcaactgctggtgcttgct
ggcgctgatggccagcctgcggcgctgctctgcgctattcccttcatccgcccgcgcgat
gtgctgcgcagcgaagcggggcagagcgcggcggacaagcagctgtcgctgcagcaggcc
atccacgcccattaccaggcattgtacgaactggcgctggcgcgccgcagcgaactcggc
gcggccctgccgatcatcgccaccgggcacctgaccaccgtgggcgccagtgccagcgag
tcagtgcgcgagatctacgtcggcgcgctggaagccttcccgacctcgtccttcccggcg
gtcgattacatcgccttggggcatatccaccgaccgcagaaggtcggcggcctggagcac
atccgctacagcggttcgccgattccattgagcttcgacgaagcgcgccagcagaaggaa
gtgctgctggtcgacctcgataccagtggcttgcgcgaagtgcgcgccttgccggtgccg
cgctaccaggccctgcagtccgtgcgcggctcgctgaaaacgctgccggcagtgatcgcc
gaggcagcgcgcgaaggcagtgaagagcgcccggtatggctggaagtgcaggtcgagatg
gacgactacctgagcgacctgcaagtacgcatcgctgcgctgtgcgaaggcctgccggtg
gaggtgctgcgcatccgccgcgcccgtggcacggcggtcgccagcctgcagggcgagcag
ggcatgctcgacgaactgacgccggagcaggtgttcgaccagcgcctggccagcgaaacc
ctggagcccgaacagacgcagcgcctgcatgagctgcatgaccaggtgcttgccgagctg
cgcgacgagtcggcctga
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