Pseudomonas fulva: Psefu_1143
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Entry
Psefu_1143 CDS
T01501
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pfv
Pseudomonas fulva
Brite
KEGG Orthology (KO) [BR:
pfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfv03400
]
Psefu_1143
DNA repair and recombination proteins [BR:
pfv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Psefu_1143
Archaeal homologous recombinant proteins
Psefu_1143
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
AAA_21
cobW
nSTAND3
AAA_15
NTPase_1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AEF21120
UniProt:
F6AC40
LinkDB
All DBs
Position
1247278..1250691
Genome browser
AA seq
1137 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHRTPR
MDKVGGENELMTRHTAECLAEVEFAVKGQGYRAFWSQRRARDKADGALQGAKAELAKLDG
EIITDKLSEKPKEVERLTGLDFGRFTKSMLLAQGGFAAFLEASANQRAELLEELTGTDIY
GQISQRVFEQTREVRNQLDQLRARAEGVELLADEQRQALADEAAQLAVEEGETQQACAEA
TRQRQWLTDLTRAEEQTAAATAQVDAAAQAERDAATELARLQLSEPAQRLQPLYQARRDA
ARALAANEEQQRNHQQELAQAQAQWRSSLEQATRASAALGLEKQQAVQRLEAECQALDAQ
LQASADHERLAAQLSGWQQAFQARDQACQSLASLQARQQAGAGQLQQFAGQLNGLAQSMQ
AAGQAKAEAERAVSEVEGRWQAALAGRSEVQWREHWQQVHTRGSALEQLAQLAERRNQLN
QQRQRTATNLARQQQSLAQKEAERGALRERYREVKQRLADQEKLLEQEQRIRALETYRAQ
LQAHEPCPLCGATEHPAIAAYQALDVSATQSERDEARQTLEALTEQGQQLGSQVAALQTQ
VAQSQEQDQDLQRQLDTLASTWQRLGETLDPLPEDEQALAAAQTRQLTEHVEINATLKAL
DGLKIELERARQAANMASQKHQAAQNQQAAIEHERDLALAAQQALDEQLIAQGERLSALE
SDLAAQLAAFGHEMPQDGTAWLAARQAEATRWHDTQQRRQALAQQLPALQHQATEAEKQA
QQWQGRWREAEGEPFAAALMEQAAARLETAQANWDSAERRCLELRITLEGIARQHQALRE
AEQAAAQQWQTALDGSPFADEAEFLGASLDDEQREQLQALKQRLEKAQTEARALQASAQA
QLTALRAEPQTEHSATYLDEHLQSLQAILKQLGQRQGEIRGLLQGDDQRRLNQQALFEAI
ARQQGEYDSWQQLNSLIGSSDGAKYRRFAQGLTLGHLVHLANGQLQRLHGRYQLARKSLG
ELELEVIDTWQGDVARDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLD
GETLEVALDALDNLNASGKMIGVISHVEALKERVAVQLKVNKGVGMGYSTLEKHYAV
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctcagcctgcgcctgaagaacctcaattcgctcaagggcgagtggaagatc
gatttcaccgccgagcctttcgccagcaatggtctgttcgccatcaccgggccgactggc
gcgggcaagaccacgctgctcgacgccatctgtctggcgctgtatcaccgcactccgcgc
atggacaaggtcggtggcgagaatgagctgatgacccggcacactgccgagtgcctggct
gaggtcgaattcgcggtgaagggccagggctatcgtgcgttctggagccagcgccgcgcg
cgggacaaggccgatggcgcgctgcagggcgccaaggccgagctggcgaagctggatggc
gagatcatcaccgacaagctcagcgagaaacctaaagaggtggagcgcctcaccggtctg
gatttcggccgcttcaccaaatcgatgctgctggcccagggcggcttcgcggcctttctc
gaagcctccgccaaccagcgcgccgagctgctcgaggagctgaccggtaccgatatctac
gggcagatttcccagcgcgtgttcgagcagacccgcgaggtcagaaaccagctcgatcag
ctgcgtgctcgcgccgaaggcgtcgaactgctggctgacgaacaacgccaggcgctggct
gatgaggcggcgcagctggcggtcgaggagggcgaaactcagcaggcctgtgccgaagcc
acccgccagcgccaatggctgaccgacctgacgcgtgccgaggagcagactgcggctgct
accgctcaggtggatgcggctgctcaggccgagcgcgacgccgccaccgagctggcgcgc
ctgcagctgagcgagcccgcccagcgcctgcagccgctgtaccaggcccggcgtgatgct
gcccgcgcattggcagccaatgaagagcagcaacgcaatcatcaacaggaacttgcccag
gcccaggcgcagtggcgcagcagcctcgaacaggctactcgggccagcgcagccctaggg
ctggagaaacagcaggcggtgcagcggctcgaggctgaatgccaggcgctggatgcgcag
ctgcaggccagcgctgaccatgaacgtctggctgcccagctaagcggctggcagcaggcc
tttcaggcccgtgatcaggcctgccaatctctcgccagcctgcaggcccgtcagcaggcc
ggggccggccagttgcagcagttcgccgggcagctgaatggccttgcccagtcgatgcag
gcggccggccaggcgaaagcggaggccgagcgggcggtcagtgaggtggaagggcgctgg
caagccgcgttggccgggcgcagcgaggtgcagtggcgtgagcattggcagcaggtgcac
acccgcggcagcgcccttgagcaactggcccagctggccgagcggcgcaatcagttgaat
cagcagcgccagcgcacggcgaccaatctggctcgccagcagcagagcctggcgcagaag
gaggccgagcgtggcgccttgcgcgagcgctatcgcgaggtcaagcagcggctggccgat
caggaaaagctgctggagcaggaacagcgcatccgcgccctggaaacctatcgcgcgcag
ttgcaggcccatgagccctgtccgctgtgcggcgccaccgagcatccggccatcgccgcc
tatcaggcgctggacgtgtcggctacccagagtgagcgtgacgaggcgcggcaaacgctg
gaagccctgaccgaacagggccagcagctcggtagccaagtcgctgccctgcaaactcag
gttgcccagagccaggagcaggatcaggatctgcagcgtcagctcgataccctggcctcc
acctggcagcgcctgggcgaaaccctcgatccgctgcctgaagacgagcaggcactcgcg
gccgcacaaacccgccagctcaccgagcacgtcgagatcaacgccacgctcaaagcactc
gacggcctcaagatcgagctagaaagagcccgtcaggccgccaatatggccagccagaaa
caccaggcggcgcagaatcagcaggctgccatcgaacatgagcgcgatctggccctggcc
gcccagcaggcgctggacgagcaattgattgcccagggtgagcgcctgagcgcacttgaa
agcgacctggccgcgcaacttgcggccttcggccatgaaatgccgcaagacggcacggcc
tggctggccgcccgccaggccgaggccacccgctggcacgatacccagcagcggcgccag
gcactggcccagcaactgccggcgttgcagcaccaggcaaccgaggccgaaaagcaggcc
cagcagtggcagggccgttggcgggaggcagagggcgagccctttgccgctgcactgatg
gagcaagccgcggcgcgccttgaaacggcccaggccaactgggatagcgccgagcgccgt
tgcctggaactgcgcatcacgttggaaggcatcgcacgccagcatcaggcgctgcgtgag
gccgagcaggctgcggcgcagcagtggcaaacggcactggacggcagcccattcgccgac
gaggccgagtttctcggcgcctctctcgatgacgaacagcgtgaacagctgcaggcgctc
aaacagcgcctggaaaaggcccagaccgaagcgcgtgccctgcaagcctctgcccaggca
caactgaccgcgctgcgcgccgagccgcagaccgagcacagcgccacatatctggatgag
catctgcagagtctgcaggcgatcttgaagcaacttggccagcgccagggcgagattcgc
gggctgttgcagggcgacgatcagcgccgcctcaaccagcaggcgctgttcgaagccatc
gcccggcagcagggcgagtacgacagctggcaacagctcaacagcctgattggctcctct
gatggcgccaagtaccggcgtttcgcccagggcctgaccctcggtcatctggtgcatctg
gccaatgggcagttgcagcgtctgcacggccgttaccagctggcgcgcaaatctctcggc
gagctggagctggaagtcatcgacacctggcagggcgatgtggcgcgcgacacccgcacc
ttgtccggtggcgagagctttctggtcagcctggcgctggccctggcgctgtccgatctg
gtcagccacaagacgcgcatcgactcgctgttcctggacgaaggcttcggcactctggac
ggcgaaaccctggaggtggccctcgatgccctggacaatctcaacgccagcggcaagatg
atcggcgtgatcagccacgtcgaggcgctcaaggagcgtgttgccgtgcagcttaaggtc
aacaaaggtgtaggtatgggctacagcacgctggagaaacactatgcagtttag
DBGET
integrated database retrieval system
