Pseudomonas fulva: Psefu_1147
Help
Entry
Psefu_1147 CDS
T01501
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pfv
Pseudomonas fulva
Pathway
pfv03410
Base excision repair
pfv03430
Mismatch repair
pfv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Psefu_1147
03430 Mismatch repair
Psefu_1147
03440 Homologous recombination
Psefu_1147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfv03400
]
Psefu_1147
DNA repair and recombination proteins [BR:
pfv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Psefu_1147
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Psefu_1147
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Psefu_1147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
AEF21124
UniProt:
F6AC44
LinkDB
All DBs
Position
1253655..1255367
Genome browser
AA seq
570 aa
AA seq
DB search
MRIESRPLPDSLPDLGNLPPLLTRLYAARGVRSAVELEKGLARLIPFTQLKGIEAAVELL
VEGLQQRQRMLIVGDFDADGATASSVGMLGLRMLGAAHVDYLVPNRFEYGYGLTPEIVAV
ALSREPDLLITVDNGISSIEGVAAAKAAGLKVLVTDHHLPGHELPAADAIVNPNQPGCTF
PSKSLAGVGVIFYVLLALRARLRELGWFTAERPEPNLGELLDLVALGSVADVVPLDANNR
ILVHQGLARIRAGRARPGLRALLEVAGKQHGRITSTDLGFILGPRLNAAGRLDDMSLGIE
CLLCEDEALARDMAVQLDQLNQDRKAIEQGMQREALAQLKDLPLENLPFGLCLFEADWHQ
GVIGILASRLKERYHRPTIAFADAGEGMLKGSARSVPGFHIRDALDAVASRHPGLISKFG
GHAMAAGLSLPAEHFETFARAFDDEVRRQLCEDDLTGRLLSDGVLSIDEFNLPLARELRN
AGPWGQHFPEPLFHGAFQLVQQRIVGERHLKVVLKSECGSVQLDGIAFGVDREVWPNPTV
RWVELAYKLDVNEFRGQESVQLLISHLAPR
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcgagtcccgcccgcttcccgattcactgcccgacctgggcaacctgccgccc
ctgttgacccgcctttacgcagcacgcggggtgcgctcggcagtggagctggaaaagggc
ctggcgcggctgatcccgttcacccagctcaaaggtatcgaggcggcggtcgagttgctg
gtcgagggccttcagcaacgccagcgcatgctgatcgtcggcgacttcgatgccgatggc
gccaccgccagcagcgtcggcatgctcggcctgcgtatgctgggcgccgctcacgtcgat
tacctggtgcccaaccgcttcgagtacggctatggcttgaccccggaaatcgtcgccgtg
gcgctgagtcgcgagcccgacctgctgatcaccgtggataacggcatctccagcatcgaa
ggcgtggcggcggccaaggcggccgggctcaaggtgctggtcaccgaccatcacctgccg
ggccacgagttgccggcggccgatgccatcgtcaatcccaaccagccgggctgcacgttc
ccgagcaagtccctggctggcgtcggggtgattttttacgtgctgctggcgctgcgtgcg
cggctgcgcgaactgggctggttcactgccgagcggcccgagccgaacctgggcgagctg
cttgacttggtcgccctgggcagcgtcgccgacgtggtgccgctggacgccaacaaccgc
atcctggtgcaccagggcctggcgcgtattcgcgccggtcgcgcgcgccctgggttgcgt
gcgctgttggaagtagccggcaagcagcacgggcggattacttcgaccgacctgggcttc
atccttggtccgcgcctgaatgcggcggggcgtctggatgacatgagcctgggcatcgag
tgcctgctctgcgaagacgaagccctggcccgcgacatggccgtgcaactcgaccagctc
aaccaggaccgcaaggccatcgagcagggcatgcagcgcgaggccctggcccagctcaag
gacctgccgctggaaaacctgccgttcggcctgtgcttattcgaagcggactggcaccag
ggcgtgatcggcatccttgcctcgcgccttaaagagcgctaccaccgcccgaccatcgcc
ttcgccgatgccggggagggcatgctcaagggctcggcgcgttctgtgccgggctttcat
atccgcgacgcgctggacgccgtggcctcccgtcaccctgggctgatcagcaaattcggc
ggccacgccatggctgccggcctgtcgctgccggccgagcacttcgagaccttcgccagg
gccttcgacgatgaagtgcgtcgccagctctgcgaggacgacctgaccggccggctgctt
tccgatggcgtgctgagcatcgacgaattcaacctgccgctggcccgtgaactgcgtaat
gccggcccctgggggcagcatttccccgagccgctgttccacggcgccttccagctggtg
cagcagcgcatcgtcggcgagcgtcacctcaaggtggtgctcaagagcgagtgcggcagc
gttcagctcgatggcatcgcctttggcgtcgaccgcgaagtgtggcccaacccgaccgtg
cgctgggtcgagctggcatacaaactcgatgtaaacgagttccgtggtcaggagtccgtt
cagttgcttatctcccacctggcaccgcgctag
DBGET
integrated database retrieval system
