Pseudomonas fulva: Psefu_1244
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Entry
Psefu_1244 CDS
T01501
Name
(GenBank) pathogenesis-related protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pfv
Pseudomonas fulva
Pathway
pfv03420
Nucleotide excision repair
pfv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pfv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Psefu_1244
03430 Mismatch repair
Psefu_1244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfv03400
]
Psefu_1244
Enzymes [BR:
pfv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Psefu_1244
DNA repair and recombination proteins [BR:
pfv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Psefu_1244
MMR (mismatch excision repair)
Other MMR factors
Psefu_1244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
AAA_11
UvrD_C
UvrD_C_2
AAA_16
Bac_DnaA
Microtub_bd
ResIII
KAP_NTPase
NPHP3_N
Mit_ribos_Mrp51
PIF1
Motif
Other DBs
NCBI-ProteinID:
AEF21221
UniProt:
F6ADN1
LinkDB
All DBs
Position
complement(1357497..1359344)
Genome browser
AA seq
615 aa
AA seq
DB search
MSEAAVADADTLMQACLNLANPKSFFLYAGAGSGKTHLLVEAIRELKSRERERLTFEGRR
IAVITYTNAACDEVLRRLEFDPLVEVSTIHAFAWRLIQGFDNEIREWLRIKLAQDIEKIE
GELARSRGDNKTSRANRRKLQSKIRRLETLDEITKFIYSPTVDNRERQALNHDEVIKLTA
AFAPERPLLDVLVDRYPVVLIDESQDTHAPVMEAFLKVQQLAQARFCLGLLGDTMQQIYG
HGVTRLDKAIPDDWLKPEKVVNRRCPRRVIDLINVIRSAADTHQQTPKPDAIEGVVRMYC
ISQSQEQAQNLEEGIAQSMAAITEDGEWATGPEGRKTLILEHKMAGRRMGFEKLFTPLYA
IEHLQTGLLDGTLPALRVFSEGVLPILTAKDDHFLLLEAVRSRSPLLSKDAMQSTGDQSA
HMQRVEEATHALLSLFEKNDPTLSEVATLLLQTQLLDVPDNLVGAMVLGAPSEAPDPEDT
NAMTNYAYQLFLERPFSELAAFASYADGLSPYGTHQGVKGLEFPRVMVVINDEEAGGFLF
SYDKLLGVKEPTKTDRDNERDGKDNALARTRRLLYVTCSRAEKSLAIVVYTPQPILAKRN
VVAAGWLQESEVEIL
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggcagctgtcgcagatgccgacacccttatgcaggcttgcctgaatctggca
aacccgaaaagtttttttctttacgcaggtgctggctcaggaaaaacccacttactcgtc
gaggctatccgcgaactcaaaagtcgcgagcgagaacgcctgacgttcgagggccggcgc
attgcggtgataacctatacaaacgcagcctgcgatgaagtgcttcggaggctagagttt
gatccactcgtggaagtctcgaccattcacgcgttcgcctggcgcctaattcaaggattc
gacaacgagatcagagagtggctaaggatcaaacttgcccaagacattgaaaagatcgag
ggcgagctagcacgttcgagaggcgacaataaaacatctcgagcaaaccgacggaagcta
caaagcaaaatacgcagacttgagactctagacgagattaccaagttcatttacagcccc
acagttgacaacagagagcgacaggctctcaatcatgatgaggtcatcaagttaactgca
gcatttgctcctgaacgccctttgttggatgttctcgtggaccgctacccagttgtattg
atcgacgaaagccaggacacccacgctccagtaatggaggcttttctgaaagtccagcaa
ttagcgcaggcacgcttctgcctggggctactgggcgacaccatgcaacagatttacggc
catggagtaacgcgccttgataaagcgataccggatgactggctgaaacctgaaaaggtc
gttaatcgccgctgccctcgtagggtaatagatcttatcaacgtaattcgaagcgctgca
gacacacatcagcagaccccgaagccagatgccattgaaggtgtagtgcgcatgtactgc
attagtcaaagccaagaacaggcacaaaatcttgaggaaggtatcgctcagtcgatggct
gcaatcaccgaggacggcgaatgggctaccggtcctgaaggccgaaaaaccttgatcctc
gaacataagatggctggacggcggatggggttcgaaaagctgttcacgcccttatacgcg
attgagcaccttcaaacaggcttgctggatgggaccttgcccgcacttcgcgttttcagc
gaaggcgttcttcccattcttaccgcaaaggacgatcacttccttctgcttgaagccgta
cgctctcgctctcccttactcagcaaggatgcaatgcaatcaacaggggatcaatcggcc
cacatgcagcgtgtagaggaagcgacgcatgccctgctctctcttttcgaaaaaaacgat
ccaacattgagcgaggtcgcaacgcttctgttgcaaacccagctgcttgatgttcctgac
aatctggttggggctatggtgttgggtgcccctagtgaggctccagatcctgaagatacg
aacgcgatgaccaactacgcctaccagctattccttgagcgtccattttcggagttggca
gcctttgcgagttatgcggatggcctttcaccctacggtacacatcaaggggtaaagggg
ctggagtttccacgagtcatggtcgtcatcaacgatgaggaggcaggcggcttcttattc
agctacgacaaattgctgggtgtaaaagaaccaacaaagactgaccgggacaacgagcgt
gacggcaaggacaacgcactagcacgtactcgtaggctgctttacgtgacttgtagtcgg
gctgagaagagcctggcgattgttgtatacacaccccagcctatactcgccaagcgaaac
gttgttgctgccggctggcttcaggagagcgaggtcgaaattctgtga
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