Pseudomonas fulva: Psefu_1556
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Entry
Psefu_1556 CDS
T01501
Name
(GenBank) RNA polymerase-associated protein rapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pfv
Pseudomonas fulva
Brite
KEGG Orthology (KO) [BR:
pfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfv03021
]
Psefu_1556
Transcription machinery [BR:
pfv03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Psefu_1556
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
DUF4164
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AEF21532
UniProt:
F6AGZ4
LinkDB
All DBs
Position
complement(1674759..1677602)
Genome browser
AA seq
947 aa
AA seq
DB search
MAEYQPGQRWISDSEAELGLGTILMQDGRMLTVLYPATGETRQYAARNAPLTRVRFSPGD
EITHFEGWKLTVREVDDVDGLLVYHGLDAKNQAVTLPETQLSNFIQFRLASDRLFAGQID
PLPWFGLRYRTLEFTSKQVQSSLWGLGGVRAQPIAHQLHIAREVADRIAPRVLLADEVGL
GKTIEAGLVIHRQLLSGRASRVLILVPENLQHQWLVEMRRRFNLEVALFDAERFIESDAS
NPFEDAQLALVALEWLCEDEKAQDALFAAGWDLMVVDEAHHLVWHPEKASREYSLVEQLA
EVIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLEAFRAESASYKPVAEAVQELLDEG
KLSAQARDAIGSFLGDESRELLDAADGGDSDARARLVRELLDRHGTGRLLFRNTRAAVQG
FPERELHPYPLPSPDEYMELPLGEHAELYPEVSYQGQAGVDEDQRWWRFDPRVEWLIDTL
KMLKKFKVLVICAHAETAMDLEDALRVRSGIPATVFHEGMSILERDRAAAYFADEEFGAQ
VLICSEIGSEGRNFQFAHHLVLFDLPAHPDLLEQRIGRLDRIGQKHKIQLHVPYMENSPQ
ERLFQWYHQALNAFLATCPTGNALQHQFGSRLLPMLENADDGQWQTLIDEATAERKRLEG
DLHAGRDRLLELNSGGAGEGEALVEAILEQDDQFALPMYMEQLFDAFGIDSEDHSDNALI
LRPSEKMLDASFPLGNDEGVTITYDRDLALSREDMQFLTWEHPMVQGGMDLVRSGSMGNT
SVALIKNKALKPGTVLLELLYVSEVVAPRKLQLGRYLPPAALRCLLDGNGNDLASKVSFD
TLNDQLEAVPRASANKFVQAQRDALTPKIAAGEAKVTPRHVERVTEAKRRLAAELDEELA
RLTALQAVNPSVRDSELDALREQREQGLAMLDKAALRLEAIRVLVAG
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtatcaaccggggcaacgctggatcagcgacagcgaagcggaactgggcttg
ggcaccatcctcatgcaggacggccgcatgctcaccgtgctctaccccgccaccggcgaa
acccgtcagtacgcggcgcgcaatgcgccgctgacccgcgtgcgcttctcgccgggcgac
gagatcactcacttcgaaggctggaagctgaccgtacgtgaagtcgacgatgtcgatggc
ctcttggtctatcacggcctcgacgccaagaaccaggccgtcaccctgccggaaacccag
ctgtccaacttcatccagttccgcctggccagcgaccgtctgttcgccgggcagatcgac
ccgttgccgtggttcgggctgcgctaccgcaccctggaattcaccagcaagcaggtgcaa
tcctcgctgtggggcctgggcggcgtacgtgcccagcccatcgcccaccagttgcacatc
gcccgtgaagtggccgaccgcatcgccccgcgcgtgctgctggccgacgaagtgggcctg
ggcaagaccatcgaagcgggtctcgtgatccatcgccagctgctctccggccgcgccagc
cgcgtgctgatcctggtgccggaaaacctgcaacaccagtggctggtggaaatgcgccgc
cgcttcaacctggaagtcgcgctgttcgacgccgagcgcttcatcgagagcgacgccagc
aacccgttcgaagatgcgcagctggcgctggtcgccctggaatggctgtgcgaggacgag
aaagcccaggacgcgctgttcgccgccggctgggacctgatggtggtcgacgaagcccac
catttggtctggcacccggaaaaggccagccgcgaatacagcctggtcgagcaactggcc
gaggtgattcctggcgtgctgctgctcaccgccacccccgaacagctcggccaggacagc
cacttcgcgcgcctgcgcctgctcgaccccaatcgtttccatgacctggaagccttccgc
gccgagagcgccagctacaagccagtggccgaagcggtgcaggagctgctcgacgaaggc
aagctcagcgcccaggcccgcgacgccatcggcagcttcctgggcgatgaaagccgtgag
ctgctcgacgctgccgacggtggcgacagcgatgcccgcgcccgcctggtacgcgagctg
ctcgaccgccacggcaccggccgtctgttgttccgtaacacccgcgccgcggtgcagggc
ttccccgagcgcgagctgcatccctacccgctgccgagcccggacgagtacatggagctg
ccgctaggcgagcacgccgagctgtacccggaagtcagctatcagggccaggccggtgtc
gacgaagaccagcgctggtggcgcttcgacccgcgcgtcgaatggctgatcgacaccctg
aagatgctcaagaaattcaaggtgctggtgatctgcgcccacgccgaaaccgccatggac
ctggaagacgccctgcgcgtgcgctccggcatcccggccacggtgttccacgaaggcatg
agcatcctcgagcgtgaccgcgccgccgcctacttcgccgacgaagaattcggcgcacag
gtgctgatctgctcggaaatcggttccgaaggccgcaacttccagttcgcccatcacctg
gtgctgttcgacctaccggcccacccggacctgctcgagcagcgcatcggccgcctcgac
cgcatcggccagaagcacaagatccagctgcacgtgccgtacatggaaaacagcccgcaa
gagcgcctgttccagtggtaccaccaagcgctgaacgccttcctggccacctgccccacc
ggcaacgccctgcagcaccagttcggcagccgcctgctgccgatgctggaaaacgccgac
gacggccagtggcaaacgctgatcgacgaagccaccgccgagcgcaagcgcctggaaggt
gatctgcacgccggccgcgaccgcctgctggaactcaactccggcggtgccggtgagggc
gaggcgctggtcgaggcaatcctcgagcaggacgaccagttcgccctgcccatgtacatg
gagcagctgttcgacgccttcggcatcgacagcgaagaccattccgacaacgccctgatc
ctgcgccccagcgagaagatgctcgacgccagcttcccgctcggcaacgacgaaggcgtg
accatcacctacgaccgcgacctggcgctgtcccgcgaggacatgcagttcctcacgtgg
gaacaccccatggtgcagggcggcatggacctggtgcgctccggctcgatgggcaacacc
tcggtggcgctgatcaagaacaaggccctcaagcccggcaccgtgctgctggagttgctg
tacgtcagcgaagtggtggcgccacgcaagctgcaactgggccgctacctgccgccggct
gcactgcgctgcctgctcgacggcaacggcaatgacctggcatcgaaggtctccttcgat
accctcaacgatcagctcgaagccgtgccgcgcgccagcgccaacaagttcgtgcaggcc
caacgtgatgcgctgacgccgaagatcgccgccggcgaagccaaggtcacgccgcgccac
gtcgagcgcgttaccgaagccaaacgccgcctggccgccgagctggacgaagaactggcc
cgcctgaccgccctgcaagcggtcaacccgagcgtgcgtgacagcgaactggacgccctg
cgcgagcaacgcgaacagggcctggccatgctcgacaaggccgctctgcgcctggaagcc
attcgggtattggtcgcgggctga
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