Pseudomonas fulva: Psefu_2016
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Entry
Psefu_2016 CDS
T01501
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pfv
Pseudomonas fulva
Brite
KEGG Orthology (KO) [BR:
pfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfv03032
]
Psefu_2016
03400 DNA repair and recombination proteins [BR:
pfv03400
]
Psefu_2016
Enzymes [BR:
pfv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Psefu_2016
DNA replication proteins [BR:
pfv03032
]
Prokaryotic type
DNA Topoisomerases
Psefu_2016
DNA repair and recombination proteins [BR:
pfv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Psefu_2016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF1416
Motif
Other DBs
NCBI-ProteinID:
AEF21987
UniProt:
F6A960
LinkDB
All DBs
Position
2145377..2148184
Genome browser
AA seq
935 aa
AA seq
DB search
MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM
RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMAT
NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAGIINGRAGIIEAYRTGRGRI
YIRARAEVEDIDKVGGRQQIVVTELPYQLNKARLIEKIAELVKEKKIEGITELRDESDKD
GMRVVIELRRGEVPEVILNNLYAQTQMQSVFGINVVALIDGQPKILNLKDMLDAFILHRR
EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALISTAWESTA
VEAMVERAGADSCRPEGLDPQYGLRDGKYYLSPEQAQAILDLRLHRLTGLEHEKLLAEYQ
EILNQIGELIRILTSAVRLMEVIREELEAVKAEFGDKRRTEILDSRLDLTLGDMIPEEER
VVTISHGGYAKTQPLTAYQAQRRGGKGKSATGIKDEDYIAHLLVANSHATLLLFSSKGKV
YWLKTYEIPEASRAARGRPLVNLLPLEEGEYITTMLQIDLEALQQQAGADDVDDSDDAVL
EGEVVEAEEVAEVAEVEEVEGETAELVAEPTGAYIFMATASGTVKKTPLVQFSRPRSNGL
IALKLKEGDTLIAAAITDGAKEVMLFSSAGKVIRFAESVVRVMGRGARGIRGMRLGKDQR
LISMLIPESGAQILTASERGFGKRTALSKFPRRGRGGQGVIGMITKERNGPLIGAIQVQD
GEEIMLISDQGTLVRTRVDEVSSSGRNTQGVTLIKLAKDEKLVGLERVQEPSEEDIEVEL
DEEGNPIVVAEADEAVAGEEPTAEGDEPAEEDRDA
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaactggccaaagaaatcctcccggtcaacatcgaagatgaactgaaacagtcg
tacctcgactacgcgatgagcgtgatcgtcgggcgtgccttgccggatgcgcgcgatggc
ctgaagcccgtgcatcgccgggtgctgttcgccatgagcgagctgggcaacgactggaac
aagccctacaagaagtccgcccgtgtggtcggtgacgtgatcggtaaatatcacccccac
ggtgacaccgccgtttacgacaccatcgtgcggatggcgcagccgttctcgctgcgctac
ctgttggtcgacggccagggcaacttcggttcggtggacggcgacaacgccgcggccatg
cgatacaccgaagtgcgcatgaccaagctggctcacgagctgttggccgacctgcacaag
gaaaccgtcgactgggtgcccaactacgacggcaccgagcagattccggcggtcatgccg
accaagatccccaacctgctggtcaacggttccagcggtatcgccgtgggcatggccacc
aacattccgccgcacaacctgggcgaagtgatcgacggctgcctggcgctgatcgacaac
ccggaactgaccgtcgatgagctgatgcagtacatccccggtccggacttcccgactgca
ggcatcatcaacggtcgcgccggcatcatcgaggcctaccgcaccggccgtggccgcatc
tacatccgcgcccgcgccgaagtcgaggacatcgacaaggtcggcggtcgccaacagatc
gtcgtcaccgaactgccgtaccagctgaataaggcccgtctgatcgagaagatcgccgag
ctggtcaaagagaagaagatcgaaggcatcaccgaactgcgcgacgagtccgacaaggac
ggcatgcgcgttgtcatcgagctgcgtcgtggcgaagtgcccgaggtgatcctcaacaac
ctctacgcccagacccagatgcagagcgtgttcggcatcaacgtggtggcgctgatcgac
ggccagccgaagatcctcaacctcaaggacatgctcgatgccttcatcctgcaccgtcgt
gaggtggttacccgccgcaccgtgttcgaactgcgcaaggcccgcgagcgtggtcacatc
ctcgaaggtcaggcggtcgcactgtccaacatcgatccggtcatcgccctgatcaaggcc
tcgccgacgccgtccgaagccaaggaagcgctgatttccacggcctgggagtccaccgcc
gtggaagccatggtcgagcgcgccggcgccgactcctgccgcccggaaggcctcgatccg
caatatggcctgcgtgacggcaagtactacctgtcgccggaacaggcccaggcgattctc
gacctgcgcctgcatcgcctgaccggcctggagcacgagaagctgctggccgagtatcag
gaaatcctcaaccagatcggcgagctgatccgcatccttaccagcgccgtgcgcctgatg
gaagtgattcgcgaggagctggaagcggtcaaggccgagttcggcgacaagcgccgcacc
gagattctcgattcgcgtctggacctgaccctgggtgacatgatcccggaagaagagcgc
gtggtgaccatttcccacggcggctacgccaagacccagccactgaccgcctaccaggcc
cagcgccgcggcggcaagggcaagtcggccaccggcatcaaggacgaggattacatcgcc
cacctgctggtcgccaacagccacgccacgctgctgctgttttccagcaagggcaaggtg
tactggctgaaaacctacgaaattcccgaagcgtcccgcgctgcccgcggccgcccgctg
gtcaacttgctgccgcttgaagagggtgaatacatcaccaccatgctgcagatcgacctc
gaggccctgcagcagcaggccggcgccgatgacgtggacgacagcgacgacgccgtgctc
gaaggcgaggtggtcgaggccgaagaagtggctgaagttgccgaggtcgaggaagtcgaa
ggtgagaccgccgagctggtggccgagccgactggcgcctacatcttcatggccaccgca
tccggcactgtgaagaagaccccgctggtgcaattcagtcgtccgcgttccaacggcttg
atcgccctgaagctgaaggaaggcgacaccctgattgccgccgccatcaccgacggcgcc
aaggaagtcatgctgttctccagcgccggcaaggtgatccgtttcgccgagagcgtggtg
cgcgtcatgggccgtggcgcccgtggtatccgcggcatgcgtctgggcaaggaccagcgc
ctgatctccatgctgatcccggaatccggcgcgcagatcctcaccgcttccgagcgtggc
ttcggcaagcgcaccgcgctgtccaagttcccgcgtcgcggccgtggcggccagggcgtg
atcggcatgatcaccaaggagcgtaacggcccgctgatcggcgccattcaggtgcaggac
ggcgaggaaatcatgctgatttccgaccagggcaccctggtgcgtacccgtgtcgacgaa
gtgtccagttctggccgcaacacccagggtgtgaccctgatcaagctggccaaggacgag
aaactcgtcggcctggagcgtgtgcaggagccgtccgaggaagacatcgaggtggagctg
gacgaagagggcaacccgatcgttgtcgccgaagccgatgaagctgttgcaggcgaagag
ccgacagcagaaggtgatgagcccgcagaggaagatcgcgacgcgtga
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