Pseudomonas fulva: Psefu_2735
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Entry
Psefu_2735 CDS
T01501
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pfv
Pseudomonas fulva
Pathway
pfv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Psefu_2735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfv03400
]
Psefu_2735
Enzymes [BR:
pfv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Psefu_2735
DNA repair and recombination proteins [BR:
pfv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Psefu_2735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
AAA_11
UvrD_C_2
Viral_helicase1
Helicase_RecD
AAA_22
SH3_13
UvrD-helicase
AAA_16
SLFN-g3_helicase
TraI_hel_assoc_N
nSTAND3
AAA_28
ATPase
AAA_29
Mg_chelatase
NTPase_1
T2SSE
DEAD
NACHT
AAA_25
TrwB_AAD_bind
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AEF22700
UniProt:
F6AH74
LinkDB
All DBs
Position
complement(2943989..2946028)
Genome browser
AA seq
679 aa
AA seq
DB search
MTPMLENRDTLFELLAAWSERGWLRELDRTLAHFFAELDPQAPPLLLLAAALASHQLGQG
HVCLDLQTTLADPDSALSLPPEGEDAEGVSLLPSEVLGGLTAGAWLAACAGSALLHDGED
EVAPLVLRGTCLYLRRYWDYERSVAEDIGERLQAAGDAPADLAQRLGVLFPEPLLLDGQR
LTDWQKLACALAARGRFTLITGGPGTGKTTTVVRLLALLQAAALDRGAPLRLSLAAPTGK
AATRLTESIGAQVATLPVSEAVREQIPNTVTTLHRLLGSRPDSRHFRHHAANPLPLDVLV
VDEASMIDLEMMANLLDALPMHARLILLGDKDQLASVEAGAVLGDLCRDAEAGGYSEATR
TWLAQQTGEHIEGAGLQPSEQALSQHIVMLRHSRRFAGGSGIGRLALAVNRGAALEAREV
LAGGGADLHQLRLAGEQDRAFERLLLDGLPDGEGRPVGYADYLNVLHEQRPGLTDSEERW
SGWTAAVLAAFDRFQLLCAVRKGPWGVEALNGRIAHALLQRGLIEQEHGWYEGRPVLVTR
NDYGLGLMNGDIGIALRLPEPALEAGGPLRSALRVVFPRNDGSGELRSILPSRLGAVETV
FAMTVHKSQGSEFAHCALVLPDTLNPVLTKELVYTGITRARDCFSLIESRAGIFEAAIGR
RVERRSGLWERLVGDAYID
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgatgctggaaaaccgcgacacgctgttcgaactgctcgccgcctggagcgag
cgcggctggctgcgcgaactggaccgaaccctggcgcatttcttcgccgagctggacccc
caggcaccgccgttgctgctgctcgccgcggcactggccagtcatcaactgggccagggc
catgtgtgcctcgatctgcagaccaccctggccgatccggattcggcgctgtcgctgccg
ccggaaggcgaggacgccgagggcgtcagcctgctgccttccgaggtgctgggcggcctg
accgcgggcgcctggctggcagcctgtgccggtagcgccttgctgcacgatggcgaggat
gaagtcgcaccgctggtgctgcgcggcacctgcctgtacctgcgccgctactgggattac
gagcgcagcgtcgccgaggatatcggcgagcgcctgcaggcggcgggtgatgcgccggcc
gatctcgctcagcgcctgggcgtgttgttccccgagccgttgctgctcgatggccagcgc
ctcaccgactggcagaaactggcctgcgccctggcggcgcgggggcgcttcaccctgatc
accggcggccccggcactggcaagaccaccaccgtggtgcgcctgctggcgctactgcag
gccgccgcgctggatcgcggcgcgccgctgcgcctgagcctggccgcacccaccggcaag
gcggcgacgcggctgaccgagtccatcggcgcccaggtggcgaccctgccggtcagcgag
gcggtgcgcgagcagattcccaataccgtcaccacgctgcaccgcctgctcggcagccgg
ccggacagccgccatttccgtcaccatgcggccaacccgctgccgctggatgtgctggtg
gtcgacgaagcctcgatgatcgacctggaaatgatggccaacctgctcgacgcgctgccg
atgcatgcgcggctgatcctgctcggcgacaaggatcagctggcgtcggtggaggccggt
gcggtactcggcgacttgtgccgcgatgccgaagccggcggctacagcgaggccactcgt
acctggctggcgcagcagaccggcgagcatatcgaaggggccgggctgcagccgagtgag
caggcgttgtcacagcatatcgtgatgctccgccattcccggcgcttcgccgggggctcg
gggatcggccgcctggccttggcggtgaatcgcggagcggccctggaggcccgtgaggtg
ctggcaggtggcggggcggatctgcaccagttgcgcctggccggcgagcaggatcgtgcc
ttcgaacgcttgttgctcgatggcttgcccgacggtgagggtcgtccggttggttatgcc
gattacctgaacgtgctgcatgagcagcgcccaggcttgaccgacagcgaggagcgctgg
agcggctggacggccgcggtgctggcggccttcgatcgcttccagttgctgtgtgcggtg
cgcaaggggccctggggcgtcgaggcgctcaacgggcgtatcgcccatgcgctgctgcag
cgtgggttgatcgagcaggagcacggctggtacgaagggcggccggtattggtcacccgt
aacgattacggcctgggcctgatgaacggcgatatcggcatcgccctgcgtttgcccgag
ccggcgctggaggcgggcgggccgctgcgctcggcgctgcgcgtggtgttcccgcgcaac
gatggttcgggcgagctgcgctcgatcctgcccagccgcctgggtgcggtggaaaccgtg
ttcgccatgaccgtgcacaaatcccaaggctctgaattcgcccattgcgccctggtgctg
ccggataccctcaatccggtgctgaccaaggagctggtatacaccggcatcacccgcgcc
cgggattgcttcagtctgatcgagagccgtgccggtattttcgaagcggccattgggcgg
cgagtcgaaaggcgcagtgggttgtgggagcggttggttggggatgcatatattgattga
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