Pseudomonas fulva: Psefu_2993
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Entry
Psefu_2993 CDS
T01501
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
pfv
Pseudomonas fulva
Brite
KEGG Orthology (KO) [BR:
pfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfv03009
]
Psefu_2993
Enzymes [BR:
pfv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Psefu_2993
Ribosome biogenesis [BR:
pfv03009
]
Prokaryotic type
rRNA helicases
Psefu_2993
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
IPPT
AAA_22
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AEF22957
UniProt:
F6AKF9
LinkDB
All DBs
Position
complement(3208189..3209538)
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AA seq
449 aa
AA seq
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MFAQFALHERLLKAVAELNFTEPTPVQAAAIPPALEGKDLRVIAQTGSGKTAAFVLPMLN
RLLGDGSSKARVSVRALIMLPTRELAQQTLKEVERFAQFTFLKGGLITGGEDFKVQAAML
RKVDIVIGTPGRLIEHANAGNLLFDDVEVLVLDEADRMLDMGFAEDVQRLAQMCNREHQT
LLFSATSGGAGLREVVAQVLREPTHLQLNRVSELAEGTRQQIITADHNYHKEQLVEWLLS
NETYDKAIIFTNTRVQADRLYGKLVAKEFKTFVLHGEKDQKDRKLAIDRLRQGAVKVLVA
TDVAARGLDVEGLDLVINFDMPRSGDEYVHRVGRTGRAGSEGLAISLITHNDWNLMSSIE
RYLKQRFEKRTVKELKGSYQGPKNLKASGKAAGTKKKKVDPKTGKKVAKKPAAKTPAKRN
TINKPKSDAGLVSQDGLAPLKRKAPSSDA
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgcccaatttgccctgcatgaacgcctgctcaaagccgtggccgagctcaacttc
accgagcccactccggttcaggccgctgcgattccaccggcgctggaaggcaaggacctg
cgggtgatcgcccagaccggcagcggcaagaccgccgccttcgtactgccgatgctcaac
cgcctgctcggtgatggcagctccaaggcgcgggtcagcgtgcgtgcactgatcatgctg
ccgacccgcgagctggcccagcagaccctcaaggaagtcgagcgctttgcccagttcacc
tttctcaagggcgggctgatcaccggcggtgaagacttcaaggtgcaggccgccatgctg
cgcaaggtcgatatcgtcatcggcacgccggggcgcctgatcgagcacgccaacgccggc
aacctgctgttcgatgacgtcgaggtgctggtgctcgatgaagcagaccgcatgctcgac
atgggcttcgccgaagacgtgcaacgtctggcacagatgtgcaaccgcgagcatcagacc
ctgctgttctccgccaccagcggtggcgccggcctgcgcgaagtggtcgcccaggtgctg
cgcgagcccacgcacctgcagctcaaccgcgtcagcgaactggccgaaggcacccgccag
cagatcatcaccgctgaccacaactaccacaaggaacagctggtcgagtggctgctgagc
aacgagacctacgacaaggcgatcatcttcaccaacacccgcgtgcaggccgaccgcctg
tacggcaagctggtggccaaggaattcaaaaccttcgtgctgcacggcgagaaggaccag
aaggatcgcaagctggccatcgaccgcctgcgccagggcgccgtcaaggtgctggtcgcc
accgacgtggcggcccgcggcctggatgtcgagggtctggatctggtgatcaacttcgac
atgccgcgctccggtgacgaatacgtgcaccgcgtcggccgtaccggccgtgccggcagc
gaaggcctggccatctcgctgatcacccacaatgactggaacctgatgtcgagcatcgag
cgctacctcaagcagcgcttcgagaaacgcaccgtcaaggagctcaagggcagctaccag
gggccgaagaacctcaaggcgtccggcaaggccgccggcaccaagaagaaaaaggtcgac
ccgaaaaccggcaagaaggtcgccaagaagcctgcggctaagacgccggccaagcgcaac
acgataaacaagcccaagagcgatgcaggcctggtcagccaggacggcctggcgccgctc
aagcgcaaggcgccgtcgtccgacgcctga
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