KEGG   Pseudomonas fulva: Psefu_3028
Entry
Psefu_3028        CDS       T01501                                 
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG
  KO
K02405  RNA polymerase sigma factor FliA
Organism
pfv  Pseudomonas fulva
Pathway
pfv02020  Two-component system
pfv02025  Biofilm formation - Pseudomonas aeruginosa
pfv02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:pfv00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Psefu_3028
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    Psefu_3028
  09142 Cell motility
   02040 Flagellar assembly
    Psefu_3028
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pfv03021]
    Psefu_3028
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:pfv02035]
    Psefu_3028
Transcription machinery [BR:pfv03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Psefu_3028
Bacterial motility proteins [BR:pfv02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    Psefu_3028
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r4_2 Sigma70_r3 UPF0122 DUF6124
Other DBs
NCBI-ProteinID: AEF22992
UniProt: F6AKJ4
LinkDB
Position
complement(3242615..3243346)
AA seq 243 aa
MSAQPALDHHYADAPVAFVPLSAAAEQQWLLRYLPLVKRVVRQLALQASQVLDREDMEQI
GLLGLLDSLRRYGEPDEQFARFASLRIRGAILDELRRLDWRPRTVRQQSHRVRDGIRDLT
RKLGREPQESEILAATGLDAQGYQDHLMAQTSEAIESLDSLLQDGQESLAGSSRSAEDQV
LRERLLTQALARLDERERLVLTLYYLHELSLKEIALVLEVSDARVCQLSKQAIAKACRFL
TEN
NT seq 732 nt   +upstreamnt  +downstreamnt
atgagcgctcagcctgccctggaccaccactacgccgacgcgccggtcgcgttcgtgccg
ctgtcggcggccgccgagcagcagtggctgctgcgctacctgccgctggtcaagcgggtg
gtccgtcagctggccctgcaggccagccaggtgctcgatcgcgaagatatggaacagatc
ggcctgctcggcctgctcgacagcctgcgtcgctatggcgagccggatgagcagttcgca
cgtttcgccagcttacgcatccgcggcgcgatcctcgacgagctgcgccgcctcgactgg
cgcccgcgtaccgtgcgccagcagtcgcaccgggtacgcgacggcattcgtgacctgacc
cgcaagctgggccgcgagccccaggagagcgagatcctagccgctaccggtctggacgcc
cagggttatcaggatcacctcatggcgcaaaccagcgaagccatcgaaagcctcgacagt
ctgctgcaggacggccaggaaagcctggccggcagcagccgcagcgccgaggatcaggtg
ttgcgcgagcgcctgctgacccaggccctggcgcgcctggatgagcgcgagcgcctggtg
ctcaccctgtattacctgcacgagctgagtctcaaggaaatcgccctggtgctcgaagtg
agcgacgccagggtctgtcaactgagcaagcaggcgatcgccaaggcttgccgctttctc
acggagaactga

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