Pseudomonas fulva: Psefu_3417
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Entry
Psefu_3417 CDS
T01501
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pfv
Pseudomonas fulva
Pathway
pfv03030
DNA replication
pfv03430
Mismatch repair
pfv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Psefu_3417
03430 Mismatch repair
Psefu_3417
03440 Homologous recombination
Psefu_3417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfv03032
]
Psefu_3417
03400 DNA repair and recombination proteins [BR:
pfv03400
]
Psefu_3417
Enzymes [BR:
pfv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Psefu_3417
DNA replication proteins [BR:
pfv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Psefu_3417
DNA repair and recombination proteins [BR:
pfv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Psefu_3417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
AEF23379
UniProt:
F6ACD3
LinkDB
All DBs
Position
complement(3673087..3676626)
Genome browser
AA seq
1179 aa
AA seq
DB search
MAVSFVHLRLHTEYSLVDGLVRVKPLVKAVAGGGMPAVAVTDMSNMCSLVKFYKAAMGAG
IKPICGADIWLASADEDGPLTRMTLLAMNPKGYRNLTELISRGWSEGQSNDLVIIQRDWV
KAASEGLIALSGAKEGEIGHALLDGELAKAEALLQEWLAVFPERFYLEVQRTSRVNDEEH
VHAAVALADKTGAPLVATNDVRFLKQSDFEAHETRVCIGEGRILDDPRRPRIYSDQQYLK
SPEEMAELFSDLPDALQNTVEIAKRCNIEVQLGKYFLPDFPVPEGMTIDEYFRKVSFDGL
EERLEVLLPKDTPDYDAKKQVYIDRLNFELDIIIQMGFPGYFLIVMDFIQWAKNNGVPVG
PGRGSGAGSLVAYVQKITDLDPLAYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIDYVA
EKYGRNAVSQIITFGSMAAKAVVRDVARVQGKSYGLADRLSKMIPFEVGMTLEKAYEMEE
PLRDFLKVDEEAAEIWDMSLKLEGIVRGTGKHAGGVVIAPTKLTDFAPIACDEEGAGLVT
QFDKDDVEQAGLVKFDFLGLRTLTIIKWALETIHRDQRAAGVAEEDLVNIDFIPLDDKPT
YQMLQKAETTAVFQLESRGMKELIKKLKPDCLEDMIALVALFRPGPLQSGMVDDFINRKH
GRAELSYPHPDYQYAGLEPVLKPTYGIILYQEQVMQIAQVMGGYTLGQADMLRRAMGKKK
PEEMAKQRGGFIEGCANNGIDADLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKA
HYPAPFMAAVLSADMHNTDKVVILIEECRSMKLRIDPPDVNASEFKFTVSHDANQTQRIL
YGLGAVKGVGEGPVEAIVEARQDGPFKDLFDFCSRVDLKRINKRTMEALIRSGALDRLGP
HFHDEIKAYQANIDRNRAVLLAAMEEAVQAAEQTARSHDSGHMDLFGGVFASPEADVYAN
HRKARELSLKERLKGEKDTLGLYLTGHPIDEYESEVRRFARQRIVDLKPARDTQTIAGLI
VNLRVMKNKKGDKMGFITLDDRSGRIEASLFADAFASNQALLQSDALVVVEGEVSNDDFS
GGMRLRAKRVMSLEEARTGLAESLRVKVQAAALKGDRLRWLGELCQRHRGACPITLDYTG
ADAKALLQFGEEWRIDPADSLIQALRDQFGRENVFLQYR
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atggctgtttccttcgttcatcttcgcctgcacaccgaatattccctggtcgatggcctg
gttcgcgtcaaaccattggtcaaggccgtggccggcggcggcatgcccgccgtggctgtc
accgacatgagcaacatgtgctcgctggtgaagttctacaaagcggccatgggcgccggc
atcaagccgatctgcggcgccgacatctggctggccagcgccgacgaagatggcccgctg
acgcgtatgaccctgctcgcgatgaaccccaagggctatcgcaatttgaccgaactaatc
tcgcgcggttggagcgaagggcagagcaacgacctggtaatcatccagcgcgactgggtg
aaagccgccagcgaagggctgatcgccctgtctggcgccaaggagggcgagatcggccat
gcgctgctcgatggcgagctggccaaggccgaagcgctgctgcaggaatggctggcggtg
ttccccgagcgcttctacctcgaagtgcagcgcaccagtcgtgtcaatgacgaagagcac
gtgcacgccgccgttgccctggccgacaagaccggcgcgccgctggtggccaccaacgac
gtgcgctttctcaagcagagcgacttcgaggcccacgagacccgcgtgtgcatcggtgaa
ggccgcatcctcgacgacccgcgccgcccacggatctactccgaccagcaatacctgaag
tcgccagaggaaatggccgagctattcagcgacctgccggatgcgctgcagaacaccgtc
gagatcgccaagcgctgcaacattgaggtgcagctgggcaaatacttcctgccggacttc
ccggtgccggaaggcatgaccatcgacgagtactttcgcaaggtctcgttcgacggcctc
gaggagcgtctcgaggtcctgctgcccaaggacacaccggactacgatgccaagaaacag
gtgtatatcgaccggctgaatttcgagctggatatcatcatccagatgggtttccccggt
tacttcctgatcgttatggacttcatccagtgggccaagaacaacggcgtaccggtgggg
ccggggcgtggttcaggtgccggttcgctggtcgcctatgtgcagaagatcaccgacctc
gatccgctggcctatgacctgctgttcgagcgtttcctgaatcccgagcgggtctccatg
cccgacttcgacgtcgacttctgcatggacggtcgcgaccgggtcatcgattacgtggcc
gagaagtatggccgcaacgcggtgagccagatcatcacttttggctccatggcggccaag
gcggtggtgcgtgacgtcgcgcgggtgcagggcaagtcctacggtttggcggatcgtctg
tcgaagatgatccccttcgaagtcggcatgaccctggaaaaggcctacgagatggaggag
ccgctgcgcgacttcctcaaggtcgacgaagaggccgccgagatctgggacatgtccctc
aagctcgaaggcatcgtgcgcggcaccggcaagcacgctgggggcgtggtgatcgcgccg
accaaactgaccgatttcgcgccgatcgcctgtgacgaggagggcgctggcctggtgacc
cagttcgacaaggatgatgtcgagcaggccggtctggtgaagttcgacttcctcgggctg
cgcaccctgaccatcatcaagtgggcgctggaaaccattcaccgcgaccagcgcgcggcc
ggcgtcgccgaagaggatctggtcaacatcgactttatcccgctcgacgacaagccgact
taccagatgctgcagaaagccgaaaccacggcggtcttccagctcgagtcgcggggcatg
aaggagctgatcaagaagctcaagcccgactgcctggaagacatgatcgcgctggtggcg
ctgttccgtcccggtccgctgcagtccggcatggtggacgacttcatcaaccgtaagcac
ggtcgcgccgagctgtcctacccgcacccggattaccaatacgcgggtctggaaccggtg
ctcaagccgacttacgggatcatcctgtatcaggaacaggtcatgcagatcgcccaggtc
atgggcggttacaccctgggccaggcggacatgctgcgccgcgccatgggcaagaagaag
cccgaggaaatggccaagcagcgcggcggtttcatcgaaggttgcgccaacaatggcatc
gatgccgatctggcgggcaacatcttcgatctggtggaaaagtttgccggctacggcttc
aacaaatcccactccgccgcctacggcctggtgtcttaccagaccgcctggctgaaggcc
cattacccggcgcctttcatggcggcggtgctgtcggcggatatgcacaacaccgacaag
gtggtgatcctcatcgaggagtgccgcagcatgaagctgcgcatcgatccgccggatgtg
aacgcctcggagttcaagttcaccgtcagccatgatgcgaaccagacccagcgcatcctc
tatggcctcggtgcggtcaagggtgtgggcgaggggccggtggaagccatcgtcgaagcg
cgtcaggacggtccgttcaaggacctgttcgacttctgctcgcgcgtcgacctcaaacgc
atcaacaaacgcactatggaggcgttgattcgcagcggcgcgctggatcgtttgggcccg
catttccacgatgagatcaaggcctaccaggccaatatcgaccgcaaccgcgccgtgctg
ctggcggcgatggaagaagccgtgcaggccgccgagcagaccgcacgcagccatgacagc
ggccacatggacctgttcggcggtgtattcgccagccccgaagcggacgtctacgccaac
caccgtaaggcccgcgagttgtcgctcaaggagcgtctcaagggcgagaaagacaccttg
ggtctgtacctgaccggccacccgatcgacgaatacgaaagcgaagtgcggcgcttcgcc
cgccagcgcatcgtcgacctcaagccggcccgcgacacccagaccatcgcaggtttgatc
gtcaacctgcgggtgatgaagaacaagaagggcgacaagatgggcttcattaccctggac
gaccgttccgggcgtatcgaagcctcgttgttcgccgatgccttcgccagcaaccaggcg
ctgctgcagagcgacgccctggtggtggtggagggcgaggtcagcaatgatgatttctcc
ggtggcatgcgcctgcgtgccaagcgggtgatgagtctggaggaggcgcgtaccgggctg
gctgaaagcctgcgggtcaaggtacaggccgcagccctcaagggcgatcggctgcgctgg
ttgggcgagttgtgccagcgccaccgcggtgcctgcccaatcaccctggactacaccggt
gccgatgccaaagccctgctgcagtttggcgaagagtggcggatcgacccggccgacagc
ttgattcaagccttacgtgaccagttcgggcgagaaaacgtcttcctgcaataccgctga
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