Pseudomonas fulva: Psefu_3675
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Entry
Psefu_3675 CDS
T01501
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
pfv
Pseudomonas fulva
Pathway
pfv02020
Two-component system
pfv02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pfv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Psefu_3675
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Psefu_3675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfv03021
]
Psefu_3675
Transcription machinery [BR:
pfv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Psefu_3675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
DUF4741
HTH_IclR
RRP4_S1
Acyl-CoA_dh_C
HTH_21
Motif
Other DBs
NCBI-ProteinID:
AEF23636
UniProt:
F6AEZ2
LinkDB
All DBs
Position
3945831..3947339
Genome browser
AA seq
502 aa
AA seq
DB search
MKPSLVLKMGQQLTMTPQLQQAIRLLQLSTLDLQQEIQEALESNPMLERQEEGEDFDNSD
PMADGAESAISPAAQEETFQESSFQESPQTVDNLEDGEWGERIPNELPVDTAWEDIYQTS
ASSLPSNDDDEWDFTTRTSSGESLQSHMLWQLNLAPMSDKDRLIAVTIIDCINDQGYLEE
TLEEIVESFDPELDVELDEVEAVLRRIQQFEPSGIGARDLRECLLLQLRQLPASTPWLKE
AQRLTSDYLDLLGNRDYSQLMRRMKLKEDELRPVIELIQSLNPRPGSQIESSEPEYVVPD
VIVRKHNDRWLVELNQEAMPRLRVNAQYAGFVKRADSSADNTFMRNQLQEARWFIKSLQS
RNETLMKVATQIVEHQRGFLDYGDEAMKPLVLHDIAEAVGMHESTISRVTTQKYMHTPRG
IYELKYFFSSHVSTSEGGECSSTAIRAIIKKLVAAENAKKPLSDSKIAGLLEAQGIQVAR
RTVAKYRESLGIAPSSERKRLM
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccatcgctagtcctgaaaatgggccagcagctgacgatgacaccgcagctgcaa
caagccattcgcctgctccaactgtcgactctggacctgcaacaggaaatccaggaggca
ttggagtccaacccgatgctggagcgtcaggaagaaggcgaagacttcgacaattccgac
ccgatggccgatggcgccgaaagcgccatctcgcccgccgcccaggaagagacctttcag
gagtcgagcttccaggaaagcccgcaaaccgtcgacaacctggaagacggcgaatggggc
gagcgtattcccaacgagttgccggtcgacaccgcctgggaagacatctaccagaccagc
gccagcagcctgcccagcaacgacgatgacgaatgggatttcaccacccgcacgtcgtcg
ggcgaaagcctgcagagccacatgctctggcaactcaacctggcgccgatgtccgacaag
gaccgcctgatcgccgtgacgatcatcgactgcatcaacgaccagggctatctggaagaa
acccttgaggaaatcgtcgaatccttcgatccggaactggacgtcgagctggatgaagtc
gaagccgtgctgcgccgcatccagcagttcgagccctcgggaatcggtgcgcgggatctg
cgcgaatgcctgctcctgcaattgcgccagctgcccgcctccacgccctggctcaaggaa
gcgcagcgcctgaccagcgactatctggacctgctcggcaaccgtgactacagccagctg
atgcgccgcatgaagctcaaggaagacgagctgcgcccggtcatcgagctgatccagagc
ctcaaccctcgcccgggctcgcagatcgaatccagcgaaccggaatacgtggtgccggac
gtgattgtgcgcaagcacaatgatcgctggctggtcgagctcaatcaggaagccatgccg
cgtctgcgcgtcaacgcccagtacgccggcttcgtgaagcgcgccgattccagcgccgac
aacaccttcatgcgcaaccagctgcaggaagcacgctggttcatcaagagcctgcagagc
cgcaacgaaaccctgatgaaggtcgccacgcagatcgtcgaacaccagcgcggtttcctc
gactacggcgacgaggccatgaagcctctggtactgcacgatatcgccgaggcggtgggc
atgcacgagtcgaccatttcccgcgtcaccacccagaaatacatgcataccccgcgtggc
atttacgagctgaaatacttcttctccagccacgtcagcacctccgaaggcggcgaatgt
tcgtcgaccgctatccgcgcgatcatcaaaaaactggtcgcagcggaaaatgcgaaaaag
ccattgagcgacagcaagatcgctggtttactggaagcacagggcattcaagtggcgcgc
cgcacagtcgccaagtaccgtgaatcgctcggtatagcgccttcgagcgaacgcaagcga
ctgatgtaa
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integrated database retrieval system
